Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_3055 |
Symbol | |
ID | 3674519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 3317658 |
End bp | 3320663 |
Gene Length | 3006 bp |
Protein Length | 1001 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637714621 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_319656 |
Protein GI | 75677235 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.554963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0720353 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCCCC AGCCTCCGCC ACCGTTCTCG GTCCCCTACG CTCCGGATGA CCGGACGATC GCGAAGCAGT TGCTCACCGG GGCGCGGCTG GCGCCTGAAC AGGAAACGCG GATCGATCAG ACGGCGCGAC GCCTGATCGA CGCGATCAGG CAAAACGACG ACCCGCTGGG CGGCGTCGAG GACATGCTGC GCGAATTTGC CCTCTCTACC AAAGAGGGGC TCGCACTGAT GGTGCTCGCC GAGGCGCTGC TGCGGGTGCC CGATGCCGAG ACCGCGGACA GGTTCATCGA GGACCGGCTC GGGCAGGGTG ACTTCATCCA CCACGAGACC CGATCCAGCG CCTTCCTCGT CAACGCATCC GCCTGGGCGC TTGGATTGTC GGCGCGGGTC ATCCAGCCGG GCGAGACGCC GCAGGGAACC ATCGGGCGGC TCGCCAAGCG GCTCGGCGTT CCGGCGATCC GCGCGGCGAC CCGGCAGGCG ATGCGGCTGA TGGGAAGCCA CTTCGTACTG GGCGAGACCA TCGAGGCGGC GCTGGAGCGG ACGCACACTC ATTCAGCGGG ATGTTCCCGC TACTCCTTCG ACATGCTCGG CGAGGGCGCG CGCACGGCGG CGGATGCGGA CCGCTATTTC GATTCCTACG CCGCGGCCAT CGAGGCGATC GGCCGCGGCG CCGGCGACAA TCCGCTGCCC GACCGCCCCG GCATTTCGGT CAAGCTGTCG GCGCTACATC CGCGCTATGA GGCGGTCAGC CGGGGACGGG TGATGGCGGA GCTGGTGCCG CGCGCCATCG ACCTCGCCAG GCGCGCCAGG GCGCTCGATC TCGCCTTCAC GGTCGATGCG GAGGAAGCCG ACCGGCTGGA GCTTTCGCTC GACGTGGTGG CCGCTATTGC CGTCGACCGC TCGCTTGCAG GATGGAGCGG CTTCGGCCTC GCCGTCCAGG CCTATCAGAA ACGCGCCGGC GCGGTGATCG ACTATATCGA CGATCTCGCA CAAGCCCTGA ACCGGCGGAT GATGGTTCGC CTCGTGAAGG GCGCATACTG GGACACCGAG ATCAAGCGCG CGCAGGAGCG CGGGCTCGAA GGTTATCCCG TGTTCACCCG CAAGGCGATG ACGGACCTGA ATTACCTCGC CTGCGCACGA AAACTGCTGG CGCTACGCCC GCGCCTCTTT CCGCAATTCG CGACCCACAA TGCCCTCACC GTCGCGACGC TGCTCGAACT GACGGGTGGA GAAAGCGGAT TCGAATTCCA GCGCCTGCAC GGCATGGGCG AAGCGCTCTA CGCCGCACTG TGCAAGGATC GTCACGCGAT CGCTTGCCGC ATCTACGCGC CGGTCGGCAG TCACCGCGAC CTGCTCGCCT ATCTGGTGCG CCGCCTGATC GAGAACGGAG CCAACTCCTC CTTCGTCGCC ACAGCCTCCG ATCCCGATGT GCCGCCGGAG ACGCTGCTGC GCAGGCCGGC CGATATCATA GGAAGCGCCG ACAATGCCGG GCACGCCAGG ATTCCATTGC CGCGCGATCT TTTCCAGCCG GAGCGCATCA ACTCGCGTGG AATCGAATTC GGCGAGCGTG CCGCCGTCAA CCGGCTGGTC ACTGATGTCG CGACTGAACG CGTCTCAGCC GTCCCCGTAA ACTATAGCGG GCCGAACGAC GTGAACCGTG CCGTTACTAC GGCGCGTGAC GGCTTCTCCA CATGGAGCCG CGCACCGGCG ACGGAGCGGG CGGCCGCCCT GGAGCGCGCG GCGGATTTGC TGGAGCAGCG ATCGGCGCGT TTCATCGCGT GGCTGCAAAG AGAAGGCGGC AAGACGCTGG ATGATTGCGT GTCGGAAGTC CGCGAGGCCG CCGACTTCTG CCGCTACTAC GCCGCGGAAG GCCGCAAGCT GTTCGGCGAC GCGCAACCGT TGCCCGGTCC GACCGGCGAA CGCAACACGC TGCGGCTACG CGGACGCGGC GTTTTTGCCG CGATCTCGCC GTGGAATTTT CCGCTGGCGA TCTTCATGGG TCAAGTGACG GCGGCGCTGA TGGCCGGAAA TGCCGTGGTC GCAAAACCGG CCGAGCAGAC GCCGCGGATC GCGGTGGAGG CCGTGCGCCT GTTGCATGAA GCCGGGATCC CGGTGAAGGC GCTTCACCTG ATTCAGGGCG ACGGACACAT CGGAGCCGCG CTCGTCGCGC ACCGCGACAT CGCGGGCGTG GTCTTCACCG GTTCGACGGA GGTGGCGCGG TCCATCAATC GCGTGCTCGC CGGAAAGGAC GGCCCCATCG TGCCGCTGAT CGCCGAGACC GGCGGCATCA ACGCCATGAT CGCCGACGCC ACCGCGCTGC CCGAGCAGGT CGCCGACGAT GTCGCGACGT CGGCATTCCG CTCGGCCGGG CAGCGCTGCT CCGCGCTGCG GCTTCTGTTC GTTCAGGAGG ACGTGGCTGA TCGCATCATC GAGATGATCG TTGGCGCGGC GCGCGAGCTG AAGATCGGCG ATCCGTCGGA TCCCGCCACG CATGTCGGCT GGGTGATCGA CGACGACGCC AGGAAACGGC TGGATGCCCA CATCGCGCGC ATGACGCGCG AGGCCCGCGT CCATTTCGCA GGGCCTGCGC CGTCATCCGG CAGTTTCGTC GCGCCTCATA TTTTCGAACT GGACGACGCG CGGCACCTGA CCGAAGAGGT GTTCGGACCG ATCCTTCACA TCGTGCGCTA CAGTTCCTCC GCGCTCGATG GCGTTCTGGA GGCCATTGCC GATAGCGGCT ATGGCCTGAC GCTCGGAATC CACTCGCGCA TCGACGATAC GGTGGAAGCG GTCGTCGACC GACTTCAGGT CGGCAACGTC TACGTCAACC GCAACATGAT CGGCGCCGTG GTCGGGGTGC AGCCGTTCGG CGGCCATGGC CTGTCGGGAA CCGGGCCGAA GGCCGGCGGC CCGCACTATC TCACCCGGTT CGCCACCGAA CAGACCGTGA CGGTGAATAC CGCCGCGGCC GGCGGCAACG CGGCATTGAT GACTGGAGAA GGCTGA
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Protein sequence | MSPQPPPPFS VPYAPDDRTI AKQLLTGARL APEQETRIDQ TARRLIDAIR QNDDPLGGVE DMLREFALST KEGLALMVLA EALLRVPDAE TADRFIEDRL GQGDFIHHET RSSAFLVNAS AWALGLSARV IQPGETPQGT IGRLAKRLGV PAIRAATRQA MRLMGSHFVL GETIEAALER THTHSAGCSR YSFDMLGEGA RTAADADRYF DSYAAAIEAI GRGAGDNPLP DRPGISVKLS ALHPRYEAVS RGRVMAELVP RAIDLARRAR ALDLAFTVDA EEADRLELSL DVVAAIAVDR SLAGWSGFGL AVQAYQKRAG AVIDYIDDLA QALNRRMMVR LVKGAYWDTE IKRAQERGLE GYPVFTRKAM TDLNYLACAR KLLALRPRLF PQFATHNALT VATLLELTGG ESGFEFQRLH GMGEALYAAL CKDRHAIACR IYAPVGSHRD LLAYLVRRLI ENGANSSFVA TASDPDVPPE TLLRRPADII GSADNAGHAR IPLPRDLFQP ERINSRGIEF GERAAVNRLV TDVATERVSA VPVNYSGPND VNRAVTTARD GFSTWSRAPA TERAAALERA ADLLEQRSAR FIAWLQREGG KTLDDCVSEV REAADFCRYY AAEGRKLFGD AQPLPGPTGE RNTLRLRGRG VFAAISPWNF PLAIFMGQVT AALMAGNAVV AKPAEQTPRI AVEAVRLLHE AGIPVKALHL IQGDGHIGAA LVAHRDIAGV VFTGSTEVAR SINRVLAGKD GPIVPLIAET GGINAMIADA TALPEQVADD VATSAFRSAG QRCSALRLLF VQEDVADRII EMIVGAAREL KIGDPSDPAT HVGWVIDDDA RKRLDAHIAR MTREARVHFA GPAPSSGSFV APHIFELDDA RHLTEEVFGP ILHIVRYSSS ALDGVLEAIA DSGYGLTLGI HSRIDDTVEA VVDRLQVGNV YVNRNMIGAV VGVQPFGGHG LSGTGPKAGG PHYLTRFATE QTVTVNTAAA GGNAALMTGE G
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