Gene Nwi_3052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_3052 
Symbol 
ID3676361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3315007 
End bp3315558 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content59% 
IMG OID637714618 
ProductTetR family transcriptional regulator 
Protein accessionYP_319653 
Protein GI75677232 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.186092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGA TCGAGCGCAA TGAAATTATA ACCCGCGCCG CCGAACTGTT CCGGATCGGC 
GGCTACGACG ACACGTCGAT GGCGCAGATC GCGGATGCCT GCGGAATCCG CAAGGCTAGC
CTCTATCACC ACTTTCCGGA GAAGGATGGG CTGGTTCTGG CGGCGATCGA GCACATCCAC
GAGCATTTTC GGAAGCACAT CTTTGCTATC GCCTACCGCA ACAATGCCGA CGCCAGACAA
AGGCTCCATG CGCTCTGCGA AGCGACGTTC AGCTACTTCA ACGGCCGGGA CGGCGGATGC
CTCCTGGGAA ATTTCGCGCT GGCGCTGACG GAACGCGCGC CGCGCTTTCA GGAGCCGTTA
CGCTCTTATT TCGACGATTG GACAAAAGCC ATCGCTCATC TGCTCACCGC GGAGCACGGA
GAGTCCAGGG CTCGCGATCT GGCTTTCGAT TCAGTTGCGC ACATCCAGGG GGCGATCATG
ATGATGCGCC TCTACCACCA ACCCCAACAT CTCCGCCGGG CGCTTGAGAC AAGCATCAGG
ATGCTCCCCT AA
 
Protein sequence
MAKIERNEII TRAAELFRIG GYDDTSMAQI ADACGIRKAS LYHHFPEKDG LVLAAIEHIH 
EHFRKHIFAI AYRNNADARQ RLHALCEATF SYFNGRDGGC LLGNFALALT ERAPRFQEPL
RSYFDDWTKA IAHLLTAEHG ESRARDLAFD SVAHIQGAIM MMRLYHQPQH LRRALETSIR
MLP