Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_3004 |
Symbol | |
ID | 3675031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 3250656 |
End bp | 3253904 |
Gene Length | 3249 bp |
Protein Length | 1082 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637714570 |
Product | TPR repeat-containing protein |
Protein accession | YP_319606 |
Protein GI | 75677185 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGTAT CCGTTAGCAG CACGATCGAG GAGATGCAGG CGGAGCGTAA CGCGCTTCAA AGCTTTGCCG ACGATCGCGC CCGCGACTTC GTCGGCAGGC AGTCGGTGCT TGCGCGTGTC ACCGACCTCT GTCTCTCCCC CGCCAAGGAG CTTTCTCCCA CGAAGGAGGG CCCGCCATGG GGGATCTGCA TCACCGGCGA TCCGGGTTCG GGCAAGAGCG CCCTGTTCGG CGAACTTCTC CGCCGCCTGA AGGAAACCGA TGCCTTCATC CTCGCGCATG CCGCGGAAGC GACCCCGCAG GCCACGTCGA TCGATGCCAT GCTGCGCCGC TGGATTACCG AGCTTGGCAG CGCCCTCGGC GCCGGCGATA TCGACCTCGC CGCCAATATC GATCCGGAGA TTGTCGAACG GGCCTTCGCC TCGCTGCTGG TGCGGATGGC TTCGAAACGG CGCGTGGTGG TCCTGATCGA CGCGATCGAC CAGTTCAGGA AAACCTCTCG CGGGAAGTTT ACGAGCTGGC TGCCGCGGCT GTGGCCGATC AATGCGCGCC TGGTCGCGAC CGGCGTTGCC GGAGGCGCCT CCAAGGCGCT GTCCGAGCGC TCCAGTGTGG AGGCGTTGGC TCTGCCGCCG CTGGAGTCGT CCGAGGCGGA GGGCATCATC GAAGCGGTCT GCAAGCGCAA CCAGCGCAAG CTGGCTTCAC CGGTGATCGA TGCACTGCTC GCGAAGAAGC ATGCGGGCGG GCCGGCCTGG GGCAATCCGT TATGGCTGGT GCTGGCGCTC GAGGAACTCG AACTGCTCGA CAGCAGTGAT TTCGCCGACA TGCAGCGTGA GTATGCCGGC TCTCCGGAGC AGCGCCTGCA GAGTGCGATG CTGGATGCGG TCGGCGCGAT GCCGACCGAC ATTCCGCTTC TCTGCCGCGC GACGTTCGAT AGCGCGGCCC AGCTGTTGAG CCCCGCGATC GCGGCGGCGT TCATCGGCCT CCTTTCCGCG GGCCGGACAG GATGGCGAGA GAGTGACTTC CGTCAATTGC TGCCGCAGGT CGGTGGCGAG GCATGGGACC AGAAGCGCTT TGCTACGCTG CGCAACCTGT TCCGCGGTCA GGTTCATCAG CATGGCGACC TTGCGCAACT GGATTTCAAC CATTCCCAGG CGCGCGCCGC CGCCCGTTCG CGCCTTGCCG CGTTGCGCGT TACGAATCCC GAACTGCACC TGCTGATCGC GGATCACCTT CTGACGCTTG CACCGGACGA CCGGCTGCGG GTGACTGAAA CCATGGTCCA TCTTCTGGCA AGCAAGGACG ACGTCCGCGC GGCCCGGCAC TATGGCGATC CATCGCTCGG CGAAAAGGAG CTGGGAGCCG CCACGCTGGC GCTCGCCGAT GCGGTCATTT CGCCGGCGAC CGGCACTCCG GCGAGCGCGG CGCGCGAGAT GTGCCGTTTG CTTGAGAACC CGGATCACTC CGTCCGCGCC CGCGTGGCCG AGCGGCTGCT CGTCAGTTTT GACGATGTGG CGGGCCGGCA CATTGCTTCC GATGTCCGCC TGATCGTTTT GAACGCGATC GAACAAGCGT TCCGGCAACT GCTGCGCGAC GAACCCGGCA ATGCCGGCTG GCAGCGCAAT CTGTCGGTTG CCCACGATCG CGTCGGCGAC GTGCTGGTGG CGCAGGGCAA GCTGCCTGAG GCGCTTGCGT CGTTCCGTGA GGGACTTGCG ATCCGGGAGA AATTGACGGG CACGGACCCG GACAATGCCG GGCTCCAGCA CGATCTATCG ATCTCGTACG AGAAGATCGG CGATCTGCTT GCGGTGCAAG GCAAGCTCGA CGAGGCGCTG GACTCGATCC GCAAGCAGCT CGCGGTTGTC GAGCGGCTGG CGAACAGCGA TCCCGACAAC GCAGACCTGC AGAGCGAGAT CTCGCTGTGC CATGAAAAGA TCGGCGAAGC GCTGATGGCG CGAGGCGATC TTCCGGGAGC GCTGGGCGCG TTCCAGAACC AGCTCGAGAT CAGCGAGCGG CTGGCGCGCG GCGCGGACAC CGACGACAGC AAATGGCAGC GCGAGCGAAC GCTCGCTTAC GATCGCGTCG GCGACGTGCT GATGGCGCAA GGCAAGCTGC CGGAGGCGCT CGAATTTTTC CGCAACGGAC TGACGATCAA GGAGCGGGTC GCAAAGGCTC ACCCCGAGAA CACGAGCTGG CAACGCAGCC TGTCGATCTC CCATGATCGC ATCGGCGACG CGCTGGTGAC GCAGGGCAAA CTGCCTGACG CGTTGACCTC TTATCGCACC GGACTTGAGA TCGCCCAGAA ACTGGCGCGC ACCGAGCCCG AGAATGTCGG CTGGCAGCGC GACCTGTCGG TGTCGCACGC CAAGATCGGC GATGTGCTGG TGGCGCAGAG CAGTCTGCCC GACGCATTGA AAGCCTTCCA TGAAGGTTTG ACGATCAGGC AGCGCCTGGC GAACGCCGAT CCCGACAATG TCGATTGGCA GCGCGGTCTG GCGGTGTCCT ACGATCGCAT CGGCGACGTG CTGATGGCGC AGGACAACAT GGGCGATGCG CTGAGCGCCT TCCAGGATCA GTTCGCGATC GCCGAGAAGC TGGCGCGGAT CGATCCGAAC AACACCGGCT GGCAGCGCGA TCTGTCCGTA TCCTACGAGA AAGTCGGCGA CGTCCAGATG GCGCAGGGCA ATCTGCCCGA CGCGTTGAAA TCCTATCGCG GGGGGCTCGC GATCAGAGAG CGGCTGGCGC GCACCGAGCC CGATAACATC AACTGGCAGC GCAGCCTGTC GGTGTCGCAC GATTGCATCG GCGACGTGCT GGAAGCTCAG GGCGAGGTGG ACGAGGCGTT GAAAGCCTTC CACGAAGGGC TTGAGATCAG GAAACGGCTA GCGCAGCGTG ATCCGTCCAA CGTCGGATGG CAGCGCGACC TGACCGTATC TTACGATCGT CTCGGCGAGG TGTTGGAATC GAAGGGCGAC CTGGAAGCGG CCGAAAAGTC CTTCCGCGAA GGGCTGGCGA TCATGGAGCG GCTGTCGCTT GCCGACCCCG GCAACGTCGA TCTGCAGCGC GGCGTGGCCG TGAGCCAGGG ACACCTGGCC GAAATGTACC GCCGGTCCAA CGATCACAAC AGCGCGCTGG CCGCATTGCG GCAGGGACAG GCCGCCATGG AGCGCGTCGT CATGCGCGCA CCTGAGAATG CCGGCTGGAA AAAAGATCTG GACTGGTTCA CCGAACAGAT CTCGACCTTG ACGGATTAG
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Protein sequence | MSVSVSSTIE EMQAERNALQ SFADDRARDF VGRQSVLARV TDLCLSPAKE LSPTKEGPPW GICITGDPGS GKSALFGELL RRLKETDAFI LAHAAEATPQ ATSIDAMLRR WITELGSALG AGDIDLAANI DPEIVERAFA SLLVRMASKR RVVVLIDAID QFRKTSRGKF TSWLPRLWPI NARLVATGVA GGASKALSER SSVEALALPP LESSEAEGII EAVCKRNQRK LASPVIDALL AKKHAGGPAW GNPLWLVLAL EELELLDSSD FADMQREYAG SPEQRLQSAM LDAVGAMPTD IPLLCRATFD SAAQLLSPAI AAAFIGLLSA GRTGWRESDF RQLLPQVGGE AWDQKRFATL RNLFRGQVHQ HGDLAQLDFN HSQARAAARS RLAALRVTNP ELHLLIADHL LTLAPDDRLR VTETMVHLLA SKDDVRAARH YGDPSLGEKE LGAATLALAD AVISPATGTP ASAAREMCRL LENPDHSVRA RVAERLLVSF DDVAGRHIAS DVRLIVLNAI EQAFRQLLRD EPGNAGWQRN LSVAHDRVGD VLVAQGKLPE ALASFREGLA IREKLTGTDP DNAGLQHDLS ISYEKIGDLL AVQGKLDEAL DSIRKQLAVV ERLANSDPDN ADLQSEISLC HEKIGEALMA RGDLPGALGA FQNQLEISER LARGADTDDS KWQRERTLAY DRVGDVLMAQ GKLPEALEFF RNGLTIKERV AKAHPENTSW QRSLSISHDR IGDALVTQGK LPDALTSYRT GLEIAQKLAR TEPENVGWQR DLSVSHAKIG DVLVAQSSLP DALKAFHEGL TIRQRLANAD PDNVDWQRGL AVSYDRIGDV LMAQDNMGDA LSAFQDQFAI AEKLARIDPN NTGWQRDLSV SYEKVGDVQM AQGNLPDALK SYRGGLAIRE RLARTEPDNI NWQRSLSVSH DCIGDVLEAQ GEVDEALKAF HEGLEIRKRL AQRDPSNVGW QRDLTVSYDR LGEVLESKGD LEAAEKSFRE GLAIMERLSL ADPGNVDLQR GVAVSQGHLA EMYRRSNDHN SALAALRQGQ AAMERVVMRA PENAGWKKDL DWFTEQISTL TD
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