| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2892 |
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| Symbol | |
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| ID | 3676848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 3127270 |
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| End bp | 3128307 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637714457 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_319494 |
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| Protein GI | 75677073 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0042428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGGACAT TTCGAGGCGG TCTCCTGATA GGCCTCGCCA TCGCCACCGC CATCGCTGCG
ATGGCGATCA CCTATGAGCG CTATGATACC AAGACCCTGA AACGGACACT CCGCCGCGAC
GCGGTGCTGT GCGGCGTCAA CACCGGCCTG CCCGGTTTTT CGAGTTCGGA CGAGAAGGGC
AACTGGTCCG GCTTCGACGT GGATTTCTGC CGCGCCGTCG CGGCCGCGAT CTTCGATGAT
CCATCGAAGG TGAAGTTCGT TCCCCTCGCC GCCGACGAAC GGTTCAAGGA ATTGCAGAGC
CGCAAGGTCG ACATCCTCGC ACGCAACTCG ACCTGGAGCA TGTCGCGGGA AACCAATTTC
AATCTCTACT TCCCGGCGGT CGCCTATTAT GACGGCGAAG GCTTCATGGT CCGCACCTCG
CGCAAGGCCG ACTCCGCGCT CGATCTCGGC GATACCAAGA TCTGTGTCCA GTCCGCCACC
ACGACCCAGC TCAACCTTGC TGATTATTTC AGGGCCAATA ACCTGAAATA CGAGGAGATC
AGGTTCGAGA AGCTGGAGGA TGTGCTGAGG GCCTATGACG AGGCCAGATG CGATGTGGTG
ACCGCCGACG TTTCGCAGCT CTACGCACTG AGGCTGCGGC TGACCAAGCC CAATGAGAGC
TTCATCCTGC CCGATGTGAT CTCGAAGGAG CCTCTGGCGC CTGTTGTCCG CCAGCGCGAC
GACGACTGGA TGATGATCAT CAAATGGACG CTCTACGCGA TGATCAATGC CGAGGAACTC
GGCGTCACCT CGAAGAATAT CGACGAGGCG ATGAAATCGA CCAAGCCCGA CGTGATGCGG
CTCGTCGGCA CCGAAGGGCA ATATGGCGAG GCCCTCGGAC TGACGAAGGA CTGGGCGGCG
CGTATCATCC GCCACGTCGG CAATTACGGC GAGGTCTACG ACCGCAATAT CGGGACCGAG
TCGAGGCTGA AGATTCCGCG CGGCCTGAAT CAGCCCTGGA ACGCCGGCGG TATCATGTAC
GCTCCGCCGC TGCGATAA
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| Protein sequence | MRTFRGGLLI GLAIATAIAA MAITYERYDT KTLKRTLRRD AVLCGVNTGL PGFSSSDEKG
NWSGFDVDFC RAVAAAIFDD PSKVKFVPLA ADERFKELQS RKVDILARNS TWSMSRETNF
NLYFPAVAYY DGEGFMVRTS RKADSALDLG DTKICVQSAT TTQLNLADYF RANNLKYEEI
RFEKLEDVLR AYDEARCDVV TADVSQLYAL RLRLTKPNES FILPDVISKE PLAPVVRQRD
DDWMMIIKWT LYAMINAEEL GVTSKNIDEA MKSTKPDVMR LVGTEGQYGE ALGLTKDWAA
RIIRHVGNYG EVYDRNIGTE SRLKIPRGLN QPWNAGGIMY APPLR
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