| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2800 |
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| Symbol | sdhA |
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| ID | 3677277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 3036425 |
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| End bp | 3038248 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637714367 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_319405 |
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| Protein GI | 75676984 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGAA ACGGCAACGC GGCGGCGGCC GTCAACGGCA AGGCCTATCC CATCGAAGAT
CATACCTATG ACGTTGTCGT CGTCGGCGCC GGCGGAGCCG GACTGCGGGC CGTCGTGGGT
TGCGGCGAGG CCGGCCTGCG CACCGCCTGC ATCACCAAGG TTTTTCCCAC CCGCTCACAC
ACCGTGGCGG CGCAGGGCGG CATTTCCGCC TCGCTCGGCA ACATGCACAA GGATGACTGG
CGCTGGCATA TGTACGATAC CGTCAAGGGA TCGGACTGGC TCGGCGATCA GGATTGCATC
GAATACATGG TGCGTAACGC ACCGGAGGCG GTCTACGAAC TCGAGCACTG GGGCGTTCCG
TTCTCCCGCA CTGAAGACGG CAGGATCTAC CAGCGCCCGT TCGGTGGCAT GACGATCGAT
TACGGCAAGA GCCAGGCCCA GCGAACCTGC GCCGCCGCCG ACCGCACCGG TCACGCCATG
CTGCATACGA TGTACGGTCA GGCGCTGCGC CGCGCCGCCG AATTCTTCAT CGAGTTCTTC
GCCATCGACC TGATCATGGA CGATCAGGGC GCCTGCCGCG GCGTGATCGC GCTGAAGCTC
GACGACGGCA CGCTGCACCG CTTCCGCGCC CAGACCACCA TTCTCGCAAC CGGCGGCTAC
GGGCGCGTTT ATGCCTCCTG CACCTCGGCG CATATCTGCA CCGGAGACGG CGGCGGCATG
GCGTTGCGCG CCGGCCTGCC GTTACAAGAC ATGGAGTTCG TCCAATTTCA TCCGACCGGC
ATCTACGGTT CGGGCTGCCT CGTCACTGAA GGCGCGCGCG GTGAAGGCGG CTATCTGGTC
AACGCCGAGG GCGAGCGCTT CATGGAGCGC TACGCGCCGT CCGCCAAGGA CCTCGCCTCG
CGCGACGTCG TCTCGCGGGC GATGACGATC GAAATCCGCG AAGGCCGCGG CGTCGGCAAG
AAGAAAGACC ACATCTTCCT GCACCTCGAC CATCTCGACC CGAAAGTGCT TCACGAACGG
CTGCCGGGCA TTTCGGAAAC GGTGAAGATC TTCGCCGGCG TCGACGTCAC CCGCGAGCCG
ATCCCGATCC TGCCGACAGC GCACTACAAC ATGGGCGGCA TCCCCACCAA CTTCCACGGC
GAGGTGGTCA CCAAAAAGGA CGGCAATGAC AACGCGGTCG TGCCGGGCCT GATGGCGGTC
GGCGAAGCCG CCTGTGTCTC CGTGCACGGC GCCAACCGCC TTGGCTCCAA CTCGCTGATC
GATCTCGTGG TGTTCGGTCG GGCCGCCGCC CGGCGCTGCG CCGAAAAGCT CACCGCCAAC
GCCGAGCAGC CCGATCTCCC CGCGAACTCC AGCGACATGG CGCTCGGACG CCTCGACAAA
TTTCGTTACG CCGCAGGCGG CACGCCGACC GCCAGGCTGC GCGAGAACAT GCAACGCGTG
ATGCAGGCCA ACTGCGCCGT CTTTCGCACC CAGGATACCC TGGCTGAAGG CCAGAAACTG
ATTCACCAGG TCCACGAAGG AATTTCCGAC CTCGCCGTGT TCGATCGCTC GCTGGTATGG
AACACGGACC TGATGGAGAC GATGGAGTAT GACAATCTCA TCTCCCAGGC GGTGGTGACG
ATGGATTGCG CCGCCAACCG CACCGAGAGC CGCGGCGCCC ATGCGCGCGA GGACTACCCG
CAACGCGACG ATCAGAACTG GATGAAACAC ACGCTGGCGC GGCTCAGCGA TCGCGGCGTC
ACCACGATCG ACTACCGCCC GGTACACGAC TACACGATGA CAAACGACGT TCAGTCGATC
CCGCCGAAGG CGCGGGTATA TTGA
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| Protein sequence | MAGNGNAAAA VNGKAYPIED HTYDVVVVGA GGAGLRAVVG CGEAGLRTAC ITKVFPTRSH
TVAAQGGISA SLGNMHKDDW RWHMYDTVKG SDWLGDQDCI EYMVRNAPEA VYELEHWGVP
FSRTEDGRIY QRPFGGMTID YGKSQAQRTC AAADRTGHAM LHTMYGQALR RAAEFFIEFF
AIDLIMDDQG ACRGVIALKL DDGTLHRFRA QTTILATGGY GRVYASCTSA HICTGDGGGM
ALRAGLPLQD MEFVQFHPTG IYGSGCLVTE GARGEGGYLV NAEGERFMER YAPSAKDLAS
RDVVSRAMTI EIREGRGVGK KKDHIFLHLD HLDPKVLHER LPGISETVKI FAGVDVTREP
IPILPTAHYN MGGIPTNFHG EVVTKKDGND NAVVPGLMAV GEAACVSVHG ANRLGSNSLI
DLVVFGRAAA RRCAEKLTAN AEQPDLPANS SDMALGRLDK FRYAAGGTPT ARLRENMQRV
MQANCAVFRT QDTLAEGQKL IHQVHEGISD LAVFDRSLVW NTDLMETMEY DNLISQAVVT
MDCAANRTES RGAHAREDYP QRDDQNWMKH TLARLSDRGV TTIDYRPVHD YTMTNDVQSI
PPKARVY
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