| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2776 |
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| Symbol | dapF |
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| ID | 3675753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 3016661 |
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| End bp | 3017554 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637714343 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_319381 |
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| Protein GI | 75676960 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0505261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCCGGA AACTGGAACC GATGAGTGTG CTCGCAAATC ACGCTTTCAG CAAGATGAAC
GGCATCGGCA ACGAGATCGT CGTTGTCGAT CTTCGCGACA ATCCTGCCAC GGTCACGGCC
GGGGAGGCTC GTGCTGTCGC ATCGCCCGGC GGCGTGCCCT ATGATCAGTT GATGGTTCTG
CAGCCCCCGC GCACTCCGGG CACCGAAGCC TTCGTTCGGA TCTACAATAA CGATGGTTCG
GAAGCCAATG CGTGCGGCAA CGGCATGCGC TGCGTCGCGC GACAGATCTT CGAGGCGACA
GACAAGACCG CGCTGACCTT CGAGACGCGC GCGGGGCTTT TGAACTGCTG GCGAGGCTCC
GCGCCCGGTC TTTACAGCGT TGACATGGGA TCGCCGAAGT TCGGCTGGAA GGATATTCCG
CTGGCCGAGG AATTCCGCGA TACCCGCTAT ATCGAACTCC AGGTCGGGCC GATCGACGCC
CCCGTGCTGC ATTCGCCGTC CGTTGTCAGC ATGGGCAATC CCCACGCCAT CTTCTGGGTT
GACGACATCC ATGCCTACGA TCTCGCCCGT TTCGGGCCGC TGCTGGAGAA CCATCCGGTG
TTTCCCGAGC GCGCCAACAT CACGCTGGCC CATATCGTCG ATCGCGATCA CATCACGATG
CGGACCTGGG AACGCGGCGC GGGCCTGACC AAGGCTTGCG GCTCGGCGGC CTGCGCGACG
GCGGTGGCGG CGGCGCGGCT CAAGCGGGTC GAGCGCATCG TTCATATGAC GCTTCCCGGC
GGCAGCCTGA CCATTGAATG GCGCGAGCGC GACGATCATG TGCTGATGAC CGGTCCGGCC
ATATTCGAGT ATGAGGGCGC CTTCGATCCG GCGCTGTTCG CGTCGGTGGC CTGA
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| Protein sequence | MIRKLEPMSV LANHAFSKMN GIGNEIVVVD LRDNPATVTA GEARAVASPG GVPYDQLMVL
QPPRTPGTEA FVRIYNNDGS EANACGNGMR CVARQIFEAT DKTALTFETR AGLLNCWRGS
APGLYSVDMG SPKFGWKDIP LAEEFRDTRY IELQVGPIDA PVLHSPSVVS MGNPHAIFWV
DDIHAYDLAR FGPLLENHPV FPERANITLA HIVDRDHITM RTWERGAGLT KACGSAACAT
AVAAARLKRV ERIVHMTLPG GSLTIEWRER DDHVLMTGPA IFEYEGAFDP ALFASVA
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