| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2762 |
|---|
| Symbol | |
|---|
| ID | 3675101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 3002057 |
|---|
| End bp | 3003487 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637714329 |
|---|
| Product | uroporphyrin-III C-methyltransferase |
|---|
| Protein accession | YP_319367 |
|---|
| Protein GI | 75676946 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
|---|
| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCC TCCCGATCTT TCTCGACACC AGTCGCGGCC CGATCCTTCT CGTCGGGGCG
GGCGACCCGG TTCGGGCCAG ATTGCGCCTG TTGCTTGCTG CGGAAGCGCG GGTGCGCTGG
CACGCGACCG ACGGCGACTT CGCGGTTTCC GGTCTTGACG CGGCTGCGGC TTCGCGGATC
GAGCGAGAGG AATCCGATCC GCGAAACGCG GATCTTGGCG GCGTCGTCGC GGTGTTCTGC
GCGGGCGCCG GAGCGATCGG CGAAAGCGTC GCGGCGCGCG CGCTCACGGC CGGTGTACCT
GTCAATGTGA TGGATGATCC CGCGCGTTCC AGCTTCATCG TCCCTGCGAT CGTCGATCGC
GGCGACGTGG TGGCGGCGAT CGGCACCGGC GGCGCGTCGC CCGTGGTGGC GCGGCGTGTT
CGCGAACGCA TCGAAGCGGT CCTGCCGGCG CGAATCGGCG ACCTCGCGGC TATGATCGGG
CGCTGGCGCA AAACGATTCA TGATCACATT CCCGACCTTC CGCTGCGTCG TCGCTTCTGG
GAGCGCGTGA TCGACGGCCC GATCGGCGAG GCGGTTCTTG CCGGCCGCGC CAATGAGGCC
GAAGGCTCGC TGAAGGCGAT TGCCGATCCG TCCGCTTATG CGGGCGCATC TGTTCCGGGC
GACATCGAGG GACGCGTCAC GTTGGTCGGC GCGGGGCCGG GCGATCCGGA CCTGCTCACC
GTCAAGGCGC TGCGGGCGCT GCAGGACGCC GACATCGTAT TCTATGACGA GCTGATCACG
CCGGAGATCC TCGATCGCGC CCGCCGCGAC GCGGTGCGTG TGCCGGTGGG TCGCCGCGTC
GGCAAACCCG GCATCGGGCA GGACGCCATC AACCGGCTGC TGATCGATGC CGCCAGATCC
GGCCGGCGCG CCGTCCGCCT CAAGGGCGGC GATCCCTTCA TTTTCGGCCG CGGCGGCGAA
GAGGTGGAGG CGCTCCGAGA GGCCGGTGTC CGCTGTTCGG TCATTCCCGG AATTACCGCA
GGGCTTGGCG CGGCCGCGGA ATCCGGGGTG CCGCTCACCT ACCGCCATGA AGCGCTGCGC
GTCACCTTCC TGACCGCGCA CAAGGCTCAC GACGCCTCGA ACGTCGACTG GTCGACGCTG
ACCGATCGCA AGATGACCGT CGTGGTCTAT ATGGGAATCA CGGCGGCGCC GGCGATCCGC
AGCGGGTTGC TGGCGGCCGG GCGTTCGCCG GAGACCCCGG TCGGCGTGTT CGCCCGCGCC
ACCCGGCCCG ACGCCAAAAC CGTCGTCGGC ATACTGGATC ATCTTCCGGC GCTGGTTCAC
GACGTCGAGG GCGGCCCCGC CATCCTTGTG ATCGGTGACG TGGTGTCGCA CTCCGCGCGA
TGGCGCAACA CGAACTCCTT CCTCCAGACA CTTCAGATGG CTGCAGAATG A
|
|---|
| Protein sequence | MKFLPIFLDT SRGPILLVGA GDPVRARLRL LLAAEARVRW HATDGDFAVS GLDAAAASRI
EREESDPRNA DLGGVVAVFC AGAGAIGESV AARALTAGVP VNVMDDPARS SFIVPAIVDR
GDVVAAIGTG GASPVVARRV RERIEAVLPA RIGDLAAMIG RWRKTIHDHI PDLPLRRRFW
ERVIDGPIGE AVLAGRANEA EGSLKAIADP SAYAGASVPG DIEGRVTLVG AGPGDPDLLT
VKALRALQDA DIVFYDELIT PEILDRARRD AVRVPVGRRV GKPGIGQDAI NRLLIDAARS
GRRAVRLKGG DPFIFGRGGE EVEALREAGV RCSVIPGITA GLGAAAESGV PLTYRHEALR
VTFLTAHKAH DASNVDWSTL TDRKMTVVVY MGITAAPAIR SGLLAAGRSP ETPVGVFARA
TRPDAKTVVG ILDHLPALVH DVEGGPAILV IGDVVSHSAR WRNTNSFLQT LQMAAE
|
|---|
| |