Gene Nwi_2720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2720 
Symbol 
ID3674609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2956005 
End bp2956718 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content62% 
IMG OID637714287 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_319325 
Protein GI75676904 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02796] TolQ protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGG CCGACGTGGC GCAGTCAGCC TTGCCCCTGG CCTCAGCCGA CGTGTCGCTG 
ATCACGCTTT TTTTCCATGC TCACTGGATC GTGAAAGCGG TCATGCTCGG CTTGCTGGCC
TGCTCGGTGT GGGTGTGGGC AATCGCGATC GACAAGACGT TTCTTTATGC CCGCACCAAG
CGCGCGATGG ACCGCTTCGA GCAGGCTTTC TGGTCGGGGG AGTCGATCGA GGACCTGTAC
CGGGCGTTGT CGGCCAAGCC GACGCAGTCG ATGGCGGCGT GTTTCGTCGC GGCGATGCGC
GAATGGAAAC GGTCTTTCGA AAGTCAGGCG CGTTCGATCG CCGGGCTTCA GATGCGGATC
GAGAAAGTGA TGAATGTTTC CATCGCGCGA GAGGTCGAGC GGCTGGAGCG GCGGTTGCTG
GTGCTGGCGA CGGTGGGCTC GGCCGGTCCT TTCGTGGGCC TGTTCGGCAC CGTGTGGGGC
ATCATGTCGA GCTTCCAGTC GATTGCCGCA TCGAAGAACA CCTCGCTCGC GGTGGTGGCG
CCGGGCATCG CCGAAGCGCT GTTCGCAACG GCGATCGGCC TTATCGCCGC CATCCCCGCG
ACTATTTTCT ACAATAAGTT CACGGCGGAA GTGAATCGTC AGGCCCAGCG CCTCGAGGGT
TTCGCCGACG AGTTTTCCGC GATCCTCTCA CGTCAGATCG ACGAGCGGGC GTGA
 
Protein sequence
MNPADVAQSA LPLASADVSL ITLFFHAHWI VKAVMLGLLA CSVWVWAIAI DKTFLYARTK 
RAMDRFEQAF WSGESIEDLY RALSAKPTQS MAACFVAAMR EWKRSFESQA RSIAGLQMRI
EKVMNVSIAR EVERLERRLL VLATVGSAGP FVGLFGTVWG IMSSFQSIAA SKNTSLAVVA
PGIAEALFAT AIGLIAAIPA TIFYNKFTAE VNRQAQRLEG FADEFSAILS RQIDERA