| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2662 |
|---|
| Symbol | |
|---|
| ID | 3675115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 2894397 |
|---|
| End bp | 2895257 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637714228 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_319267 |
|---|
| Protein GI | 75676846 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.392241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCAG ACCATCCCGC GCCACCGTTT GCCACCCAGA AGCAGCCCAT GCCAGGCACG
ACGGCAAGGA TGGAACCACG GCCGGACCAT GGCGAGAGCA GCTACAGGGG TTCGGGCAGG
CTGCGGGGAT TGAGAGCGAT CATTACGGGC GGCGATAGCG GTATCGGCCG GGCCGTCGCC
ATCGCTTTCG CGCGCGAGGG CGCGGACATT CTCATCGCCT ATCTGAACGA GAGCGAGGAC
GCCCAGGAGG TGAGATCATT GATCGAGAAG GAGGGGCGCA AGGCCGCCCT CGTGGCCGGC
GATATCAGCG ACCCCGACCA TTGCCGGGCG ATCGTTCGAC GCGCCGTGGA CGAGCTTGGA
GGTCTCGATA TCGTCGTCAA CAACGCGGCG CATCAGGCGA CGTTCAGGGA GATCGGGGAC
ATCAGCGACG ATGAGTGGCG AATGACCTTC GAGGTCAACA TTCACGCGAT GTTCTATCTG
ACCAAGGCGG CGGTGCCCCA CCTCAAACCA GGCAGCGCGA TCATCAACAC GACGTCCATC
AACTCCGATA TGCCCAATCC GATCCTGCTC GCTTATGCCA CGACGAAAGG CGCCATCCAG
AACTTTACGG GTGGGCTGGC GCAGATGCTC GCCGAAAAAT CCATCCGCGT GAATGCTGTT
GCTCCCGGCC CCGTCTGGAC CCCGTTGATT CCCTCCACCA TGCCCGAGGA GGTCGTGACC
GACTTCGGCA AGCAGGTTCC GATGAAGCGC CCCGGGCAGC CCGCCGAACT GGCGACCGCC
TATGTCATGC TGGCCGATCC GCTCTCGAGC TATACGTCCG GCACCACCGT GGCGGTGACC
GGGGGTAGAC CTTTCATCTG A
|
|---|
| Protein sequence | MSSDHPAPPF ATQKQPMPGT TARMEPRPDH GESSYRGSGR LRGLRAIITG GDSGIGRAVA
IAFAREGADI LIAYLNESED AQEVRSLIEK EGRKAALVAG DISDPDHCRA IVRRAVDELG
GLDIVVNNAA HQATFREIGD ISDDEWRMTF EVNIHAMFYL TKAAVPHLKP GSAIINTTSI
NSDMPNPILL AYATTKGAIQ NFTGGLAQML AEKSIRVNAV APGPVWTPLI PSTMPEEVVT
DFGKQVPMKR PGQPAELATA YVMLADPLSS YTSGTTVAVT GGRPFI
|
|---|
| |