| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2550 |
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| Symbol | |
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| ID | 3675265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 2773349 |
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| End bp | 2775391 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637714116 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_319155 |
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| Protein GI | 75676734 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0219746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCG ATAATGACGA TGACAATGCG CGCCCGCGTG GGCGGCGTGA TCGGCCTTCC
GGCGGCAAGG GTAAACCCAG GGGCAGGTCG GGCGCGCCGC GCGGTCCGGA AAAGAAGCTT
GCCAGGCGCG GCTTGGCTGG CAAGTCCGAT ACCGGAACGT CCGAAAGAGG TGATGGTGAT
AAGCGGCCCT ATGCCGGCAA GTCCGATGGC GCGAAGCCTT CCGGCAAGAA GCCCTATGCC
AGAAAGCCCC ATGCTGGCGC GGGCAAACCT TACGCGGGCA AGCGAGATGG CGGGACCGCG
CGGCCTCGGT TCAATCGCGA CGACGGCGGC GAGAAGCGTC CCTACACGCC ACGCGGCGAG
GGTTTTCGGA AAGACGGCGA CCGTCCGCAG CGTGCGCGGC CGCAAGGTGA CCGGCCTTAT
GGCGCGCGTC CGCCGCGCGA GGGTGGTGGC GAGAAGCGTC CGTATACGCC GCGCGGGGAT
CGTCCCTTCG GTGACAAGAA AACGTTTTCA CGCGGTGGAC CCGAGCGTGG CTCGCGCGGA
CCGCGCAAGG AGTTCGGCGA CCGCGAGGGG CGTAACAGGG GCGACGAAAA GCCGTGGCAG
AAGCGCGACG CCGGCCCGCG CGATGATCGC CGCGGGTCGC GACCGTCTCG TGACGGTGCG
GGGCGTCCAC GATTTTCGAA GTCACGCGAG GATCGCGTTG AGCGAGCTGC GGGCGCCGAT
CGCGGTCCCC GCAAGTTTGA TCGTCCGCAA GGCGATCGTC CGCGTTATGA CCGTCGCTCC
GATGATCGCC CTCGCTTCGA TCGCCCGCGA CAGGATCGTC CCGATGGCGA CCGTTCTCGT
GGTGCCAGCA ATGCCTGGCA GGAGCGCCCG CGCCGGTTTG ATCGTGATGA TCGTCCCCGT
CGCCATGATC GTGACGATCG TCCGCGTCGT GACAATGAGG ACGACAGCAA GGTTTTCGCA
AAACGTCCGG CGTTCGGGGG ACGCGGCGCC TATCGCGAAC GCGCGCCTGA CGGCGAGCGG
CGTGGCGCGC GGGCCGAGCC GAAACCAAAG AAAGCCGGTG AACGCGTCGC GAAAATGATC
TCGCGCGCCG GTCTCGCCTC GCGCCGCGAC GCGGAGGAAA TGGTCACGCA AGGCCGCGTC
GCCGTCAACG GCCGCGTCAT CAACTCGCCG GCGCTCGATG TCACCTCGCG CGACGTCGTC
ACGGTTGATG GCCAGCCGTT GCCCGAGCGG GAACGCACGC GGCTGTTCCT GTATCACAAG
CCGCGCGGAC TGATGACGAC CCACGCTGAT CCCGAAGGGC GGCCGACGGT ATTCGATCAT
CTGCCCGAAG GTCTGCCGCG CGTGATCAGC GTCGGCCGGC TCGACTTCAA CACCGAAGGA
CTGCTGCTCC TGACCAACGA CGGCGGGCTG GCCCGCGCGC TGGAACTGCC CGACACCGGC
TGGCTGCGGC GCTATCGGGT CCGCGCCCAT GGCGAGGTGA CGCAGGCGCA ACTCGATGCC
TTGAAGAACG GCGTCGAGGT CGACGGCGTC AAGTATGGCT CGATCGACGC CACGCTGGAG
CGCGATCAAG GTGCGAATGT GTGGCTGACC TTTGCGATCC GCGAGGGCAA GAACCGCGAG
GTGCGCAATG TGATGGCGCA TCTCGGGCTC GAGGTGAACC GGCTGATCCG TATCTCCTAT
GGACCCTTCC AGCTTGCCGA GATCGCGGAA GGCGAGGTCG AGGAGGTGAA GACGCGCGTG
CTGCGGGAGC AACTCGGCGA CAGAATCGCC ACGCTCGCCA ACATGGATCC ATCGGGCGCC
GCGGCCGAAG CCGGGGCCGC CAACCTCGGC CGTGACGGCA CGCCGCTACG CTCCAAGAAA
GACAACAAGG CGAGAACGAA GCGCGCGCTG ATCGAGGATC GCCAGGGCCG CAGCGTCGTG
GTGCAGCGGA CCGGTAGCGA TGAGGCGCGG GCGCGCAACG AAGCCGAGGC CAATGGCTAT
GGACCGCCGC GCCGGCCGAA GCGCGGCTAT CACGGCAAGC GCGACCTGAC GCCACGGGAT
TGA
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| Protein sequence | MPRDNDDDNA RPRGRRDRPS GGKGKPRGRS GAPRGPEKKL ARRGLAGKSD TGTSERGDGD
KRPYAGKSDG AKPSGKKPYA RKPHAGAGKP YAGKRDGGTA RPRFNRDDGG EKRPYTPRGE
GFRKDGDRPQ RARPQGDRPY GARPPREGGG EKRPYTPRGD RPFGDKKTFS RGGPERGSRG
PRKEFGDREG RNRGDEKPWQ KRDAGPRDDR RGSRPSRDGA GRPRFSKSRE DRVERAAGAD
RGPRKFDRPQ GDRPRYDRRS DDRPRFDRPR QDRPDGDRSR GASNAWQERP RRFDRDDRPR
RHDRDDRPRR DNEDDSKVFA KRPAFGGRGA YRERAPDGER RGARAEPKPK KAGERVAKMI
SRAGLASRRD AEEMVTQGRV AVNGRVINSP ALDVTSRDVV TVDGQPLPER ERTRLFLYHK
PRGLMTTHAD PEGRPTVFDH LPEGLPRVIS VGRLDFNTEG LLLLTNDGGL ARALELPDTG
WLRRYRVRAH GEVTQAQLDA LKNGVEVDGV KYGSIDATLE RDQGANVWLT FAIREGKNRE
VRNVMAHLGL EVNRLIRISY GPFQLAEIAE GEVEEVKTRV LREQLGDRIA TLANMDPSGA
AAEAGAANLG RDGTPLRSKK DNKARTKRAL IEDRQGRSVV VQRTGSDEAR ARNEAEANGY
GPPRRPKRGY HGKRDLTPRD
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