Gene Nwi_2348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2348 
Symbol 
ID3674494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2569420 
End bp2570316 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content60% 
IMG OID637713912 
Producthypothetical protein 
Protein accessionYP_318954 
Protein GI75676533 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01932] HflC protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0876936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG GAGTTTTAGG GATCGCCGCG CTACTGGTTG GACTGGCCCT GCTGGTGGTG 
GGATACAGTT CTGTTTTCAC CGTGGGCCAG ACCGAACAGG TGCTGCTGGT GCGACTGGGC
GAGCCGGTAC GCGTCGTCAC CGAGCCGGGA CTGCATTTCA AGGCGCCGTT CGTTGATTCC
GTCATCGAGA TCGACAAACG AATTCTGGAC CTTGAGCAGG CGTCGCAGGA AGTCATCGCG
TCGGACCAGA AGCGGCTCGT CGTCGATGCG TTCGCGCGTT ATCGCATCAA GGACGCCTTG
CGTTTCTACC AAAGCGTGGG CTCCATTCAG GTCGCTAATA TCCAGTTGAC GACGCTGCTC
AACGCGTCGC TGCGCCGGGT TCTCGGTGAG GTGACATTCA TTCAGGTGGT GCGGGATGAG
CGTGAAATGC TGATGGCGCG CATCCGCGAT CAACTCGACA AGGAGGCCAG CGGATACGGC
ATCTCGGTGG TCGATGTCCG GATCCGGCGC GCCGATCTGC CGGAACAGAA CAGCCAGGCG
ATCTATCAGC GGATGCAGAC CGAGCGACAA CGGGAAGCCG CCGAATTCCG CGCCCAGGGT
GGTCAGAAGG CGCAGGAAAT CCGGGCCAAG GCCGATCGGG AGGCGACCGT CATCATCGCC
GAGGCCAACT CGGCGGCGGA GCGGATCCGT GGTCAGGGTG ATGGCGAGCG CAACAGGCTT
TTCGCCCAGG CCTACAATCA GGATCCGGCG TTCTTTGCAT TCTATCGGTC GATGAGCGCT
TATCAGAACG GGTTGAAGAG TTCCGACACG CGTTTCCTTC TGAAACCGGA TTCTGACTTC
TTCCGTTTCT TTGGACATAT CGGCGGCCGG TCGGCTGCCT CCGCACCGAA GCCTTAG
 
Protein sequence
MKTGVLGIAA LLVGLALLVV GYSSVFTVGQ TEQVLLVRLG EPVRVVTEPG LHFKAPFVDS 
VIEIDKRILD LEQASQEVIA SDQKRLVVDA FARYRIKDAL RFYQSVGSIQ VANIQLTTLL
NASLRRVLGE VTFIQVVRDE REMLMARIRD QLDKEASGYG ISVVDVRIRR ADLPEQNSQA
IYQRMQTERQ REAAEFRAQG GQKAQEIRAK ADREATVIIA EANSAAERIR GQGDGERNRL
FAQAYNQDPA FFAFYRSMSA YQNGLKSSDT RFLLKPDSDF FRFFGHIGGR SAASAPKP