Gene Nwi_2306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2306 
Symbol 
ID3675930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2523702 
End bp2524172 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content65% 
IMG OID637713869 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_318912 
Protein GI75676491 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02803] TonB system transport protein ExbD, group 1 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.426715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.290697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCAT CGATCGCGGA AGGCGGCTTC GACGACGACG AGGAGTACGG CGAAGCCCAC 
GAGATCAACG TCACGCCGTT CATCGACGTG ATCCTGGTTC TTCTGATCAT CTTCATGGTG
GCCGCGCCGC TGTCGACCGT CGATCTTCCG GTCAACCTGC CGACATCGAG CGCGACGCCG
CAGAAGAAGC CGGACAAGCC GACCTATGTC AGCATCAAGG CCGATCTCGC GGTGGCGATC
GGCGAGACGC TGGTCAAGCG GGTCGACCTG GTGCGGACGC TGGAGACCAC GCCGAACATG
ACGAAGGAGA GCTTCATCTT TCTGCGCGCC GATCGCGCGG TGCCCTATGG CGACCTGATG
GACGTGCTGG AGATCCTGCG TACCGGCGGC TACGCGAAGA TCAAGCTGGT GGCGCTGGAG
GGCGTTCCCG ACGCCCGGTC GGTTCCGGCG GCGAACACGG CGGGGCGTTG A
 
Protein sequence
MGASIAEGGF DDDEEYGEAH EINVTPFIDV ILVLLIIFMV AAPLSTVDLP VNLPTSSATP 
QKKPDKPTYV SIKADLAVAI GETLVKRVDL VRTLETTPNM TKESFIFLRA DRAVPYGDLM
DVLEILRTGG YAKIKLVALE GVPDARSVPA ANTAGR