Gene Nwi_2285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2285 
Symbol 
ID3675733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand- 
Start bp2497756 
End bp2498457 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content59% 
IMG OID637713848 
ProductTetR family transcriptional regulator 
Protein accessionYP_318891 
Protein GI75676470 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.522027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.380806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCC TGCGGATGAC CGGCGATCTG CGACGTGAGT TGATTTTGAG CGCTGCGAAA 
CAGTGTTTCG CACGCAACGG GTTCGCGGGT ACGACGACCA GAAGCGTTGC GGCTGCCGCA 
TCGATCTCAG AGGCGTTGCT GTTCAAGCAT TTTCCCACCA AGGCCGCGCT CTACGCCGAA 
ATTCTGGCTG AAGCTTGCGA GGCGGATCCG GCGCTGCATC GCCTGCTCGA TCGCGAGCCC 
TCAACGGAGA CGCTCGTTAT CCTTGTTCGC GGCATGGTCA GGCATTTCCT GAATGTCTCC 
GCTTCGCCGG ATCAGCAGGA AGCGCAGCGC CTGCGCCTCA TGGTTTCAAG CCAGCTCGAT 
GATGGCGAAT TTGCCCGGTT GCTGTACGAG AAAATCCGGA ATCTGATCGG CGGGGCCTTC 
ACGGCTTCAC TTGAGCAGGC GATTGCAAAA GGGGATGCCG AGCCGGTAGG GCGGGACCCG 
CTCAATCTGT TCTGGTTCGC GCATCATACG GTTCTCATGT TGGTTCTCAG CAGGCTTCCT 
TCCGTTCCAG CCCTGTCATA TGGCGGCGGG CCCGACCTGG AACGGCAGAT TAGTGAATTC 
ATTCTTCGGG GGATCGGTTT GAACGCAGCG GCAATTGCCT TGCATCTGGA CCGGGAACCT 
GTATTCAACG CCGCCCAAAC GTCGGCCGCA GAAAGTGCAT GA
 
Protein sequence
MSSLRMTGDL RRELILSAAK QCFARNGFAG TTTRSVAAAA SISEALLFKH FPTKAALYAE 
ILAEACEADP ALHRLLDREP STETLVILVR GMVRHFLNVS ASPDQQEAQR LRLMVSSQLD 
DGEFARLLYE KIRNLIGGAF TASLEQAIAK GDAEPVGRDP LNLFWFAHHT VLMLVLSRLP 
SVPALSYGGG PDLERQISEF ILRGIGLNAA AIALHLDREP VFNAAQTSAA ESA