Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_2266 |
Symbol | ispH |
ID | 3675171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 2469319 |
End bp | 2470263 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637713829 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_318872 |
Protein GI | 75676451 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.270565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.401567 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACTGATC CTCGTCCGAT TGAAGTTCTG CTGGCACAGC CGCGCGGATT CTGCGCAGGC GTTGTCCGCG CGATCGAGAC TGTCGAACGC GCGCTGGAGA AGTACGGTCC CCCAGTGTAT GTCCGCCACG AGATCGTACA CAACAAATAC GTCGTCGAAA GCCTGAAGAA TAAAGGGGCG ATTTTCGTCG AGGATCTGTC GGAGGTCCCT CCAAAGGCGG TGACCGTATT CAGTGCTCAC GGCGTGGCGC AAAGCGTGGA AGAAGAGGCC GCCGCTCGCG GTCTTCCCGT GCTCAACGCC ACCTGCCCGC TCGTCACCAA GGTTCACAAC CAGGGCAAAC GCTACACGTC CAAGGGCCGG ACCCTGATCC TGATCGGCCA TGCCGGCCAT CCCGAGGTCG AGGGAACTAT GGGACAGGTT CCAGGACCCG TCCTGCTTGT TCAGAATGTC GACGACGTCG CGGCCCTGAC GCTGCCCGCC GATACGCCCG TGGCCTATAT CACGCAGACG ACGCTGAGCG TCGACGACAC CAAGGACATC ATCATCGCCC TCCAGCAGCG TTTTACTGAT ATTCAAGGTC CCGATACGCG GGATATCTGC TATGCAACGC AGAATCGCCA ATCCGCGGTA AGAGACCTGA GCAAGCTGGT GGACGTCATT CTGGTGGTCG GCGCAGCCAA TAGTTCCAAT TCAAACCGGC TGCGGGAAAT TGGCACCGAG GTCGGCGTCG CCAGTTATCT TATCGCTGAC GGCAGCGAAC TCAACGCTGA GTGGCTGGAA GGGGCGAAAG CCGTGGGCGT TACCGCGGGC GCTTCGGCTC CGGAAGTCCT GGTCGACGAC GTCATCGAGG CCTTGAAGCG CATCAGGCCG GTCGCTGTCT CGGTCCTGCC GGGACGCGAA GAGAACATTG AATTCCGGCT TCCCTCTGAA CTCACCTCAG CTTGA
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Protein sequence | MTDPRPIEVL LAQPRGFCAG VVRAIETVER ALEKYGPPVY VRHEIVHNKY VVESLKNKGA IFVEDLSEVP PKAVTVFSAH GVAQSVEEEA AARGLPVLNA TCPLVTKVHN QGKRYTSKGR TLILIGHAGH PEVEGTMGQV PGPVLLVQNV DDVAALTLPA DTPVAYITQT TLSVDDTKDI IIALQQRFTD IQGPDTRDIC YATQNRQSAV RDLSKLVDVI LVVGAANSSN SNRLREIGTE VGVASYLIAD GSELNAEWLE GAKAVGVTAG ASAPEVLVDD VIEALKRIRP VAVSVLPGRE ENIEFRLPSE LTSA
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