Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_2255 |
Symbol | dnaE2 |
ID | 3677144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 2453061 |
End bp | 2456588 |
Gene Length | 3528 bp |
Protein Length | 1175 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637713818 |
Product | error-prone DNA polymerase |
Protein accession | YP_318861 |
Protein GI | 75676440 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCCGA CGCGCGACAC TCCGTGCTAT GCCGAAATCG GCATCGCCAC CAACTTCTCG TTCCTTCATG GCGCGTCGCA TCCGCAGGAG TATGTACATC AGGCCAGCGA GCTTCGGCTG CCTGTCATCG GCATTGCCGA CCGCAACACG CTGGCGGGCG TGGTGCGCGC CTATACGGAG CTAAAAAATC CCGAAGTTCG TTATAAGCCG CGGCTGCTGA TCGGATCGCG CCTCGTCTTC ATCGACGGTA CGCCTGACAT TCTCATCTAT CCTCGGGACC GGAATGCCTA TGGCCGGCTC TGCCAGTTGC TGACCCGCGG CAAGCGGGCC GCGACGAAGG GCGAGTGCCA TCTGAAGCTG GATGATCTTC TGGATTTTTC CGAAGGGCAG CTGCTTGTGC TGGCCTTGCC GCATCGTCTT GAAACGGCGA GAGCCATGGA GGTGCTGGAC CGGTTGAGGC AGGCTAGCGC GGACGGCGTC TGGCTCGCGG CAAGTCTGCT CTATCGCGGC GACGATCGCC GCCGCCTGTT GCGATTGCAG CGGATCGCGG CCACCGCTCA TGTCCCGCTG CTTGCGACCA ACGAAGTGCT GTACCATCAC CCCGCACGCC GTCCGTTGCA GGATGTCCTC ACCTGCGTTC GCGAAAAGAC CGCGGTCGAT GCCATCGGCC GAAGGCTTGA ACTCAATGCC GAGCGTCATC TGAAATCGGC GTGCGAGATG GAGAAGCTGT TTCGTGATCT CCCGGAAGCG ATCGCCGAAA CAATGCGGTT CGCATCGCGC ATCGAATTCA CGCTCGACCA GCTTCAGTAT CAATATCCCG ACGAGCCTGT GCCGCTGGGC AAGAGCGCGC AGCGGCACCT TGAGGATCTG ACGTGGGCGG GCGCTCACAA GTACTTTCCG GTGCGTATTC CGCCCAGGAC CAGGAAAGTC CTGCACAAGG AGTTGCGTTT GATCCGGCGG CTCAAATACG CGCATTACTT TCTCACCGTG CACGACATCG TGCGGTGGGC GCGCGATCAG GACATTCTCT GCCAGGGGCG CGGATCGGCT GCGAATTCGG CGGTGTGCTA CGTGCTCGGC GTCACATCGG TGGATCCCAC CAAGGTCGAC TTGCTGTTCG AGCGCTTTAT TTCCAGGGAA CGGCTGGAGC CGCCTGATAT CGACGTCGAT TTCGAGCATT CGCGCCGCGA GGAGGTGATG CAGTATGTCT ATCGCCGTTA TGGCCGTCAT CGCGCCGCGA TTATCGCCAC CGTCATTCAT TATCGGCCGC GCAGCGCCAT CCGCGATGTC GGCAAGGCGC TGGGCCTGAC CGAGGATGTC ACGGCGGCGC TTGCCGACAC GGTGTGGGGA AGCTGGGGCG ATGAGGTCAG CGACGCGCAG ATCAGGCAGG CGGGATTTGA TCCGCGGAAC CCGATGGTGC GCCGCGCCGT CGCGCTCGCC ACCGAGCTGA TCGGGTTTCC GCGCCATCTG TCACAGCATG TCGGCGGCTA TGTGCTGACC CAGGATCGGC TCGACACCTA TGTGCCGATC GGCAATGCGG CGATGGAGAA TCGCACCTTC ATCGAGTGGG ACAAGGACGA TGTCGACGCG CTCCGGATGA TGAAGGTCGA CGTGCTGGCG CTGGGAATGC TGACCTGCAT TCGCAAATGT TTCGATCTGA TGGCGGAGCA CAAGGGAGAA CGGCGGGAGC TGGCGGATAT CAGGTCGAGG GACGACGACG AAGTCTATCA GATGTTGCAG CGAGGCGAAT CCCTCGGCGT GTTCCAGGTC GAAAGCCGCG CCCAGATGAA CATGCTGCCG CGCTTGAGGC CGCGCACGTT CTACGATCTC GTCATCGAGG TCGCCATCGT TCGCCCCGGA CCGATCCAGG GCGACATGGT GCATCCTTAT CTGAAGCGGC GGGCCATGGA CCCGGAGAAG ATCGACTATC CCTATCCGAA GAACGGCGAC AGGAACGAAT TGCGCAACGT GCTGCACAAG ACGCTCGGCG TGCCGCTGTT TCAGGAGCAG GCCATGCGCA TCGCCATCGA GGCTGCGAAA TTCACCTCCG AGGAAGCCAA CGGCCTGCGT CGCGCCATGG CGACATTCCG TCATGTCGGC ACCATCGGAA AATTCGAAGC CAAGATGGTC GGCAACATGA TCGCGCGCGG CTATGATCCG GTGTTCGCGA GAAACTGTTT CGAGCAGATC AAGGGATTCG GATCCTATGG TTTTCCCGAA AGCCACGCGG CGAGCTTTGC GCAGCTTGTC TATGTGTCCG CATGGCTGAA GTGTTTCCAT CCGGATGCAT TCTGCTGCGG TCTTTTGAAT TCGCAGCCGA TGGGTTTTTA CGCGCCGGCG CAGATCGTCG GCGATGCCCG CAAGAACGGC GTCGAGGTGC GGCCGGTCGA CGTCTCGTTC AGCCATTCGC AGAACACGCT GGAAGAGCGC ACGGGCAGGT ATTGCGCCGT GCGTCTCGGC TTTCGCCAGA TCGACGGATT CAAGTGGGTT GATAAGGATG AGGAGCGGGG CAGGCAGCAG GCGGCCGATA AGGAGTTGTT CCCTCCCCCC TTGTGGGGGA GGGTCAGGGA GGGGGGTGAG CTACAAGACC AGTGCTTGAG ATGCTCTCCT CTCCACCTCT CCTCCACAGG GGGGGAGAGA GCAGGCAGTG CGTGGATTGG AACTTCAAAC CCGTCGTCGC GAGAGCAGCT ATTTTCTTCT TCGCTGACAT CCGATGACTG GGGTGAGCGG ATCGTGGCCG CGCGCCAACA CAGGCCGTTC GCCTCCATTG AGGACTTTGC CCGCGCCACG AAACTGCCGA AGCGAGCTCT GATCCTGCTG GCCGATGCCG ATGCCTTTCG CTCGCTCGGG CTGGACCGCC GCGCGGCGCT ATGGGCGGTG CGCCGCCTGC CGGATGACGT GCCGCTGCCA TTGTTCGAAA GCGCCATCGC GCGCGAACTG CCTGACGAAC ATGCCGCGCC TCTGCCTCCG ATGCCGCTAT CCGAGCAGGT GGTAGCCGAT TATCAGACCG TGCGGTTGTC GCTGAAGGGC CATCCGATGG AATTTTTGCG CGGGACATTA TCAAACGAGG GCGTGGCGAG TTGCGCCGAG GTTTGCCATG CCAATGACAG GCGGCGCGTC AGATGCGCGG GCGTGGTGCT GGTGCGGCAG CGGCCGGGCA GCGCCAACGG CGTCGTCTTC ATGACGCTGG AAGACGAGAC CGGAATTGCC AATATCGTGG TGTGGCCGAA GATCATGGAG CGCTACCGCA AGGAGGTGAT GGGCGCGCGG CTGATCGAGG TGGAGGGCCT CATCCAGAGC AGCCCGGAGC GGGTCGTCCA TCTTGTCGCA AGCAGGCTCG CTGATCGTTC AGCCGAACTG ATGCATCTGG CGAACGACGC GCTGGTTTCC CGTCACCCGC TGCCGCAACC CGCCGCATCG GCCGAACCGT TCAGTGACGA TCGCCGTGAT CAGCCCGCCC ATGCGGCGCA ACGCGTCCGT CACCCCCGCA ATGTGCGTAT CCTGCCACGC TCGAGGGATT TTCATTGA
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Protein sequence | MRPTRDTPCY AEIGIATNFS FLHGASHPQE YVHQASELRL PVIGIADRNT LAGVVRAYTE LKNPEVRYKP RLLIGSRLVF IDGTPDILIY PRDRNAYGRL CQLLTRGKRA ATKGECHLKL DDLLDFSEGQ LLVLALPHRL ETARAMEVLD RLRQASADGV WLAASLLYRG DDRRRLLRLQ RIAATAHVPL LATNEVLYHH PARRPLQDVL TCVREKTAVD AIGRRLELNA ERHLKSACEM EKLFRDLPEA IAETMRFASR IEFTLDQLQY QYPDEPVPLG KSAQRHLEDL TWAGAHKYFP VRIPPRTRKV LHKELRLIRR LKYAHYFLTV HDIVRWARDQ DILCQGRGSA ANSAVCYVLG VTSVDPTKVD LLFERFISRE RLEPPDIDVD FEHSRREEVM QYVYRRYGRH RAAIIATVIH YRPRSAIRDV GKALGLTEDV TAALADTVWG SWGDEVSDAQ IRQAGFDPRN PMVRRAVALA TELIGFPRHL SQHVGGYVLT QDRLDTYVPI GNAAMENRTF IEWDKDDVDA LRMMKVDVLA LGMLTCIRKC FDLMAEHKGE RRELADIRSR DDDEVYQMLQ RGESLGVFQV ESRAQMNMLP RLRPRTFYDL VIEVAIVRPG PIQGDMVHPY LKRRAMDPEK IDYPYPKNGD RNELRNVLHK TLGVPLFQEQ AMRIAIEAAK FTSEEANGLR RAMATFRHVG TIGKFEAKMV GNMIARGYDP VFARNCFEQI KGFGSYGFPE SHAASFAQLV YVSAWLKCFH PDAFCCGLLN SQPMGFYAPA QIVGDARKNG VEVRPVDVSF SHSQNTLEER TGRYCAVRLG FRQIDGFKWV DKDEERGRQQ AADKELFPPP LWGRVREGGE LQDQCLRCSP LHLSSTGGER AGSAWIGTSN PSSREQLFSS SLTSDDWGER IVAARQHRPF ASIEDFARAT KLPKRALILL ADADAFRSLG LDRRAALWAV RRLPDDVPLP LFESAIAREL PDEHAAPLPP MPLSEQVVAD YQTVRLSLKG HPMEFLRGTL SNEGVASCAE VCHANDRRRV RCAGVVLVRQ RPGSANGVVF MTLEDETGIA NIVVWPKIME RYRKEVMGAR LIEVEGLIQS SPERVVHLVA SRLADRSAEL MHLANDALVS RHPLPQPAAS AEPFSDDRRD QPAHAAQRVR HPRNVRILPR SRDFH
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