Gene Nwi_2211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2211 
Symbol 
ID3676879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2403978 
End bp2404814 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content67% 
IMG OID637713774 
ProductABC transporter, ATPase subunit 
Protein accessionYP_318817 
Protein GI75676396 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.620578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC CTGCTCCCAT TCTCGACGTC GATGGACTGA CGATGCGGTT CGGAGGCATT 
CTCGCCATCA ACGAGCTGTC GTTCACCGCG CAGCGCCGCC ACATCACCGC GCTGATCGGG
CCGAACGGCG CGGGCAAGAC AACGGTGTTC AACTGCGTCA CCGGGTTCTA CCGGCCCTCG
CGAGGCGCCA TGCGCCTGGT GCACGATGAC GGCGCGACCT TTCGGCTCGA TCGCCTGCGC
GACTTCCGCA TCTGCAAATA CGCCAAGGTG GCGCGTACCT TCCAGAACAT CCGCCTGTTT
CCCGGCATGA CGGCGCTGGA GAACCTGATG GTCGCGCAGC ACAATGCGTT GATGCGCGCG
TCCGGTTTCA GCCTGCTCGG CCTGATCGGC GCCCCGTCGT TCCGGGCCGC GGAGAAGCAG
GCAATCGATT CCGCGCGCGA CTGGCTCGAC CGCATCGGCC TGCTGCAACG CGCCGACGAC
GCCGCGGGCA ACCTCCCCTA CGGCGACCAG CGCCGCCTGG AGATCGCGCG CGCAATGTGC
GCGCAGCCCG CGCTGCTCTG CCTCGATGAG CCGGCCGCGG GGCTCAACGC CAACGAGAGC
GCGGGCTTGA GCGAGCTGTT GCTGTCGATC CGCAGCGACT TCGGCACGTC TATCCTTCTG
ATCGAGCACG ACATGAGCGT GGTGATGGAA ATCTCCGACC ACATCATTGT GCTCGACCAC
GGCGTCAAGA TCGCCGACGG CACGCCACGC GCGGTGCGCG ACGATCCGAA AGTCGTCGCT
GCCTATCTCG GCGCCGACGA GGACACCGCC GCCGCCGTGA TGGAGGGCGA CGTATGA
 
Protein sequence
MTTPAPILDV DGLTMRFGGI LAINELSFTA QRRHITALIG PNGAGKTTVF NCVTGFYRPS 
RGAMRLVHDD GATFRLDRLR DFRICKYAKV ARTFQNIRLF PGMTALENLM VAQHNALMRA
SGFSLLGLIG APSFRAAEKQ AIDSARDWLD RIGLLQRADD AAGNLPYGDQ RRLEIARAMC
AQPALLCLDE PAAGLNANES AGLSELLLSI RSDFGTSILL IEHDMSVVME ISDHIIVLDH
GVKIADGTPR AVRDDPKVVA AYLGADEDTA AAVMEGDV