Gene Nwi_2156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2156 
Symbol 
ID3674574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2353950 
End bp2354849 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content65% 
IMG OID637713718 
Product3-hydroxyisobutyrate dehydrogenase 
Protein accessionYP_318762 
Protein GI75676341 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR01692] 3-hydroxyisobutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.501348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCA TAGCGTTCAT CGGTCTCGGC AACATGGGCG GACCCATGGC TGCCAACCTC 
GTCAAGGCCG GCCACAGTGT GGTCGGTTTC GATCTCGTTC CGGCCTTGTG CGACGCAGCC
AGAACGAACG GCGTGACCAT CGCGGGCAGC GCAAGAGCCG CGGTGACAAA CGCGGACGTC
ATCATCACCA TGCTGCCGGC GGGCCGGCAC GTGGTGTCGG TCTGGACCGA TGTCATGCCC
GCGGCGACCA GGGGCGCGCT GATGATCGAT TGTTCAACCA TCGATGTCGA AAGCGCCCGG
CGGGCCCATA TGCTGGCGGC GAGGGCTTCC CTGCATTCGG TCGACGCGCC GGTCTCGGGA
GGCGTCGCGG GCGCGAGGGA CGCAACGCTG ACGTTTATGG TCGGGGGAGA AGTTGAATCC
TTCGAGGACG CAAAGCCTTT CCTGGAAGCA ATGGGCAAGA AGATCGTCCA TTGCGGCCGG
GACGGGACGG GGCAGGCCGC CAAGATCTGC AACAACATGA TCCTCGGCGT TTCGATGATC
GCGGTCGCCG AGGCCTTCGT GCTGGCGGAA AAGCTCGGCC TGTCGCATCA GGCGCTGTTC
GATGCCGCAT CAAAGGCGTC GGGCCAGTGC TGGTCGCTCA CCAGCTACTG TCCGGTGCCG
GGACCGGTTC CGACATCGCC CGCGAATAAC GACTACAGAC CGGGTTTCGC CTCGGCGCTG
ATGCTGAAGG ATCTGACGCT GGCGAGGGCG GCGGCGGATT CCACCGGAAC GGTGACGCCG
CTTGGACAGC ACGCGCAGGA TATCTACAAG GCGTTCGATG CGGCCGGAAA CGGCGAGGTC
GATTTCTCGG GAATCATCCG GCATATCCGG GCGCTTGCGG AAAGCAGCGG CGACCGATGA
 
Protein sequence
MAAIAFIGLG NMGGPMAANL VKAGHSVVGF DLVPALCDAA RTNGVTIAGS ARAAVTNADV 
IITMLPAGRH VVSVWTDVMP AATRGALMID CSTIDVESAR RAHMLAARAS LHSVDAPVSG
GVAGARDATL TFMVGGEVES FEDAKPFLEA MGKKIVHCGR DGTGQAAKIC NNMILGVSMI
AVAEAFVLAE KLGLSHQALF DAASKASGQC WSLTSYCPVP GPVPTSPANN DYRPGFASAL
MLKDLTLARA AADSTGTVTP LGQHAQDIYK AFDAAGNGEV DFSGIIRHIR ALAESSGDR