| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2092 |
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| Symbol | |
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| ID | 3674649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 2290544 |
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| End bp | 2291563 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637713657 |
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| Product | conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_318701 |
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| Protein GI | 75676280 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.277798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGGGACA AGAGAAATAA TGCTGTGCCG GCGCTGATCG CCATGATGCT GACGACGACG
GCGCTCGCCG GCTGTGCCAA CAAGTTCATT CCGCCGGATA TCAATTATGA CGACGCCGCG
CCCGCCGTGC TCAGCGCCGA TCCGGTCGGG CCGGTCAAGG TCGTCGAACT GCCGAAGCCG
CTGCCGTTGC CGGGTCAGTT GAAACCCGTC AATGCCGCGA AGACCAAGCC CGAGCCCGCC
GATCCAAAGA AGCGTGTCGC GCAGGCCAAT GAAGCGGCGC GCATGCAGCC GGTGCGCAAC
GGTTTCATCA ACGCCGTGCA GGTCTATCCG TTCGTCGTCG GCGCGCTCTA TCAGGTCTAT
GCCGCCCCCG GTCAGGTCAC GGACATCGCG CTTCAGCCGG GCGAACAGCT TGTCGGCGCC
GGTCCCGTCG CCGCCGGCGA CACCGTGCGC TGGATCGTCG GCGATACGCT CAGCGGCTCC
GGGCAGACCG CGCAGGTCCA CATCCTCGTC AAGCCGACGC GGCCAGACCT TCAGACCAAC
CTCGTCATCA ACACCAACCT GCGCACCTAT CACATGGAGC TGCGCTCGAC CGAAAAGACC
TACATGGCCT CGGTGTCGTG GCAGTATCCG CAGGACCAGT TGATTGCACT GCGCCGGCAG
AACCAACAGG CCGCGCTGAC GCAGCCGGTC GCGTCCGGCG TCGACATCTC GAAGCTGAAC
TTCCGTTATC AGATCGAGGG CGACGATGCG CCGTGGCGAC CACTGCGCGC CTTCGATGAC
GGCAACAAGG TCTATATCGA GTTTCCGTCG GGGATCGGCC AGGGCGAGAT GCCGCCGCTG
TTCGTCATCG GACCGTCCGG AAACTCCGAG CTGGTCAACT ATCGCGCCCG CGAGAATTAC
TACGTCGTCG ATCGTCTCTT TGCCGCCGCC GAACTCAGGC TGGGCGATAA GGACAGCGAG
AAGCGCGTGC GCATCGTGCG CACCGACGGC CGTCCTGGGC GCGGGCTGAG GTTGTTCTGA
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| Protein sequence | MGDKRNNAVP ALIAMMLTTT ALAGCANKFI PPDINYDDAA PAVLSADPVG PVKVVELPKP
LPLPGQLKPV NAAKTKPEPA DPKKRVAQAN EAARMQPVRN GFINAVQVYP FVVGALYQVY
AAPGQVTDIA LQPGEQLVGA GPVAAGDTVR WIVGDTLSGS GQTAQVHILV KPTRPDLQTN
LVINTNLRTY HMELRSTEKT YMASVSWQYP QDQLIALRRQ NQQAALTQPV ASGVDISKLN
FRYQIEGDDA PWRPLRAFDD GNKVYIEFPS GIGQGEMPPL FVIGPSGNSE LVNYRARENY
YVVDRLFAAA ELRLGDKDSE KRVRIVRTDG RPGRGLRLF
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