Gene Nwi_2038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2038 
Symbol 
ID3675817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2227696 
End bp2228499 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content73% 
IMG OID637713602 
ProductTonB like protein 
Protein accessionYP_318649 
Protein GI75676228 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.970768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.85242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA TCGACTGGCG CGACCCGGAC GGCCGGGCCG GCGATGATGT GAACCGGGCG 
GCGGCGCTGC GCTGGACCGC GGCCGGGCTT GCGGTGGTGG CGCTGCATGC CGGCGGCATC
TGGATGGCGC TGCACTGGCC GGCGGCGGCG GAGGCGCCGG GCGATCCGCC GGCGGCGATC
ATGATGGAGC TGGCGCCGAT GGCTGTCGCG CCCGAGGCGC CGCAGCAGGA CGTCGCGCCG
GGGCCGGAGA TGGTGGAGGC CGAGGAGCAG GTCGATCCGG ACAAGCCGAT CGAGGAGAAG
CCTGATCCCG AGCCGACGCC TCCGGAGGTG AAGGAGGCCG AGGTCAAGCT GCCGGAAACG
CCGAAGGTGG AGAAGGCGGA GGTTGTGCTG CCGGCCAAGG TCGAGCCGCC GAAGCCGAAG
CCGAAGAAGA AAAAGCAGAA GAAGGCGCCG CGCACCACCG CGCCGCAGAG TTCGCAGGCG
CAGCGCGCCG ATCGCGCGGC CGCGCCGGCC GAAGGCATGG CGTCGTCGAT GTCGCCGGCG
ACCTGGCGCG CCGCGCTGAT GGCGCATCTC AACCGCCACA AGCGCTTCCC GCCGGGCGCG
GGCATGGGCG TGGCCTCGGT CGCGTTCACG ATCGACCGCT CGGGCCGGGT GCTGTCGGCG
CGCCTGGTGC GCTCGGCCGG CGATTCCTCG CTCGACGCCG AGGCGGTGTC GCTGCCGCGC
CGCGCCAGCC CCGTCCCAGC CCCTCCCTCC AACGTCGGCG GCGGCTCCAT CACACTCGCC
GTCCCAATCA GGTTCAACAG ATAA
 
Protein sequence
MMKIDWRDPD GRAGDDVNRA AALRWTAAGL AVVALHAGGI WMALHWPAAA EAPGDPPAAI 
MMELAPMAVA PEAPQQDVAP GPEMVEAEEQ VDPDKPIEEK PDPEPTPPEV KEAEVKLPET
PKVEKAEVVL PAKVEPPKPK PKKKKQKKAP RTTAPQSSQA QRADRAAAPA EGMASSMSPA
TWRAALMAHL NRHKRFPPGA GMGVASVAFT IDRSGRVLSA RLVRSAGDSS LDAEAVSLPR
RASPVPAPPS NVGGGSITLA VPIRFNR