Gene Nwi_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2012 
Symbol 
ID3674200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2200927 
End bp2202171 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content60% 
IMG OID637713576 
Productcyclopropane-fatty-acyl-phospholipid synthase 
Protein accessionYP_318623 
Protein GI75676202 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.285178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGTG TATTACGGTT TTTTCTGAAC CAGTTTGTCC GGCGCGGCTC GATCACATTC 
GTAACCGCGA GCGGCCTGAC CTTTACCTGC GGCGACGGCA CCGGCGAACC TGTTCGGGTG
CGGCTGACGA CGAGCGAAGT CGCGCGCCAG CTTCTGCTCG ATCCTGAAAT GTCCTTCGGC
GAGACCTATA CCGACGGCAC GTTGCTGATC GAACGGGGAT CAATCGCGGA CCTCCTGACG
GTAATCCTCG ACCAGCCCGA CGTCATGCCC CGCTGGGGGA AGTTGCAGTG GTGGCTCCGC
TATCTCGTCC GCAACATCCA GCAGTTCAAC CCACGCGGGC GGTCAAGGGA TAACGTCGCG
CGCCATTATG ACCTCGACGG CAGGCTTTAT TCGCTGTTCC TCGATGCGGA CCAACAATAC
AGTTGCGCGT ATTTTGAAAC CCCCGACACG ACGCTGGACG ACGCCCAGCT TGCAAAGAAA
CGGCATATCG CCGCCAAGCT TCTGCTCGAA CGCGATCACA GCGTCCTTGA TATAGGTTCG
GGCTGGGGCG GCCTCGGCCT GTATCTCGCT GAAATGACCG GGGCCAACCT CACCGGCATT
ACGCTATCAA CTGAACAGTT TCAGGTGTCC AACGCCCGCG CGGTGGAGAA AAAGCTGACG
CGGTCGGCGA AGTTTCTGCT CCAGGATTAT CGCGACATTC CCGGACCGTT CGATCGCATC
GTATCCGTCG GAATGTTCGA GCACGTCGGC GTCGACCACT ACGATACCTT TTTCAAGCGC
TGCGCCGGGC TGCTCGAACC TGACGGCGTC ATGCTGCTGC ATTCGATCGG CCGTTCGGAA
GGTCCGGGCA TCACCAATCC CTGGATCGCG AAATACATCT TCCCCGGCGG CTACATCCCC
GCGCTGTCGG AAGTCCTGCC GGCCATCGAA GGCGCCGGAC TGCTGGTCTG CGACATCGAA
GTCCTGCGTC TGCACTATGC GGAAACGCTG AAGGCATGGC GGGAGCGCTT CATGGCGCGA
CGCGAGGAAG CGGTGCGGCT ATATGACGAG CGGTTCGCGC GGATGTGGGA ATTTTATCTG
GCGGCATCGG AAATGTCGTT CCGGAAGCAG AATCTGATGA ATTTCCAGAT TCAGATCACG
AAACGGCAAG GCATCGTGCC TGTAACGCGC GACTACATCC AGCGCGGGGA AGCAAAGCTG
CGCGGTCTGG AGCAAAAACA CCGGCCCCGG CTTCAAATCG CGTGA
 
Protein sequence
MDRVLRFFLN QFVRRGSITF VTASGLTFTC GDGTGEPVRV RLTTSEVARQ LLLDPEMSFG 
ETYTDGTLLI ERGSIADLLT VILDQPDVMP RWGKLQWWLR YLVRNIQQFN PRGRSRDNVA
RHYDLDGRLY SLFLDADQQY SCAYFETPDT TLDDAQLAKK RHIAAKLLLE RDHSVLDIGS
GWGGLGLYLA EMTGANLTGI TLSTEQFQVS NARAVEKKLT RSAKFLLQDY RDIPGPFDRI
VSVGMFEHVG VDHYDTFFKR CAGLLEPDGV MLLHSIGRSE GPGITNPWIA KYIFPGGYIP
ALSEVLPAIE GAGLLVCDIE VLRLHYAETL KAWRERFMAR REEAVRLYDE RFARMWEFYL
AASEMSFRKQ NLMNFQIQIT KRQGIVPVTR DYIQRGEAKL RGLEQKHRPR LQIA