Gene Nwi_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2004 
Symbol 
ID3674192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2191626 
End bp2192117 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content68% 
IMG OID637713568 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_318615 
Protein GI75676194 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.166059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.662003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCAT CCGTCCTCCC GTTGGTCGAA GCCGCCGCGC ATTGGCCCGC GCGCGGTGCG 
CTCGTCGGAT TGGACCTCGG CACAAAGACC ATCGGCGTCG CGGTGTCCGA TCCGGACCGC
CGCCTCGCCA CCGGCGTCGA AACCATCCGC CGCAAGACGT TCACGGCGGA TGCCGCGCGG
CTTCTCGCCA TTGCAGGCGA ACGCCGCGCG GAAGGTTTCA TCCTTGGATT GCCGATCAAC
ATGGACGGCA GCGAAGGGCC GCGCGCGCAG TCGACTCGCG CCTTTGCGCG CAATCTGGCC
AGGCTCACCG ATTTCGCCAT CGGCCTATGG GACGAGCGGC TCTCGACGGC GGCCGTCGAG
CGCGAACTGA TCGGGTTGGA CATGAGTCGC GCAAGGCGCG CCAAGGTCAT CGACGAACAC
GCCGCGATCT TTATTCTGCA GGGCGCGCTG GACCGGCTTG CGACGCAGCG GCGCACGTCC
GGGCCGGGAT GA
 
Protein sequence
MPASVLPLVE AAAHWPARGA LVGLDLGTKT IGVAVSDPDR RLATGVETIR RKTFTADAAR 
LLAIAGERRA EGFILGLPIN MDGSEGPRAQ STRAFARNLA RLTDFAIGLW DERLSTAAVE
RELIGLDMSR ARRAKVIDEH AAIFILQGAL DRLATQRRTS GPG