| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1874 |
|---|
| Symbol | |
|---|
| ID | 3675330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 2055966 |
|---|
| End bp | 2057402 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637713435 |
|---|
| Product | NADH dehydrogenase subunit N |
|---|
| Protein accession | YP_318486 |
|---|
| Protein GI | 75676065 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
|---|
| TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.687941 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.163647 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTTTG AGGCTGCCGG ATATCAACTT CTTCCCGTCC TACCGGAGGT CGCTCTGGCG
GTCGGCGCGA TGGTTTTGCT GCTGATCGGG GCGTGGTGCG GCCAGCGCGC GGCCGGTCTC
GTGACCGGCC TTGCGATCTG TCTCCTGATC GGGGCCGGCG TGATCGAGTA TCTGTTGCCG
AGCGGCAAGC TGGTTACGTT CGGCGGCAGC TTCATCGTCG ATGACTTCGC TCGATTCTTG
AAGATACTCG CCTTGCTCGG CTCCGCGGCG ACGCTCGTTC TGTCGCGGGA GTTTCTTCAG
GACCAGTCGC GCCGGATGTT CGAGTTCGCG ATCCTCGTGA TGCTTTCGAC GGTCGGCATG
ATGGTGCTGA TTTCGGCGGC CGACCTGATC ATGCTGTATC TCGGGCTCGA ATTAATGAGC
CTTGCGCTTT ACGTGGTGGC GGCGAGCAAC CGCGACAATG TGAAGTCGAC CGAGGCGGGC
TTGAAATACT TCGTTCTCGG CGCGCTAGCG TCGGGGATGT TGCTCTACGG CGCGTCACTC
ATCTACGGTT TCACGGGAAC CGTCAGCTTC GCCGGTATTG CCGCCGCCGC GAAGAGCGGC
AGCATCGGCG TCGTCTTCGG CATCGTCTTT CTGCTGGCCG GCCTTTGTTT CAAGGTGTCG
GTGGTGCCGT TCCATATGTG GACGCCGGAT GTTTACGAGG GAGCGCCGAC GCCGGTCACG
GCCTTCTTCG CCTCGGCGCC GAAGATCGCG GCGATGGCGG TGTTCACCCG CGTGGTGCTG
ACGGCATTCT CCGGGGTCGT CGCCGAGTGG CAGCAGATCG TGGTTTTCGT GGCGATCGCG
TCCATGGCGC TGGGCTCGTT CGGCGCGATC GGACAGCGCA ACATCAAGCG CCTGATGGCT
TATTCCTCGA TCGGCCACAT GGGTTTCGCT CTGGTCGGTC TCGCCGCCGG AACGGTTGAA
GGCGCGCAGG GCGTCGTGCT GTATCTCGTC ATCTATACCG TGATGACGTT CGGGGCCTTC
ACGGTCATCC TCGCCATGAG CCGTAACGGT CAGCCGCTCG AACAGATCAG CGACTTCGCG
GGATTGTCGC GGACAAATCC GCTGCTGGCG TTTTGCTTCG CCATGCTGCT GTTCTCACTG
GCCGGAATAC CGCCGCTGGC CGGGTTCTTC GCCAAGTTTT ATGTGTTCAG CGCCGCCATC
AAGGCGGGGC TGTTCGCGCT GTCTGTGATC GGCGTCATCA CCAGCGTGGT CGGCGCATTC
TACTATCTCA ACGTGATCAA GGTGATGTAT TTCGACGAGC GGGCCGAGGC GACGGACGCT
GTTCATCTCG AATTGCGTTC GATCGTGGCC GCGACCGCGC TTTTCAACAT GCTGTTCTTC
GCGTATCCCG GACCTCTGGT CAGCGCCGCC ACGGCGGCTG CGAAGTCACT GTTCTGA
|
|---|
| Protein sequence | MMFEAAGYQL LPVLPEVALA VGAMVLLLIG AWCGQRAAGL VTGLAICLLI GAGVIEYLLP
SGKLVTFGGS FIVDDFARFL KILALLGSAA TLVLSREFLQ DQSRRMFEFA ILVMLSTVGM
MVLISAADLI MLYLGLELMS LALYVVAASN RDNVKSTEAG LKYFVLGALA SGMLLYGASL
IYGFTGTVSF AGIAAAAKSG SIGVVFGIVF LLAGLCFKVS VVPFHMWTPD VYEGAPTPVT
AFFASAPKIA AMAVFTRVVL TAFSGVVAEW QQIVVFVAIA SMALGSFGAI GQRNIKRLMA
YSSIGHMGFA LVGLAAGTVE GAQGVVLYLV IYTVMTFGAF TVILAMSRNG QPLEQISDFA
GLSRTNPLLA FCFAMLLFSL AGIPPLAGFF AKFYVFSAAI KAGLFALSVI GVITSVVGAF
YYLNVIKVMY FDERAEATDA VHLELRSIVA ATALFNMLFF AYPGPLVSAA TAAAKSLF
|
|---|
| |