| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1860 |
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| Symbol | dnaE |
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| ID | 3674509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 2039205 |
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| End bp | 2042711 |
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| Gene Length | 3507 bp |
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| Protein Length | 1168 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637713421 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_318472 |
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| Protein GI | 75676051 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.100328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGA AGACCCTCGC GGCTCCCGCA GGTTTCGTTC ACCTGCATGT CCATTCGGCC
TATTCCTTGT TGAAGGGCTC GATCAAGATC CAGAAGCTGG CGGAACTGGC CAGGGCGGAC
CACCAGCCGG CCCTGGCGCT CACTGACACC GACAACATGT TCGGAGCGCT GGAATTCTCC
GACAAAGTCG CAGGCCTTGG CATCCAGCCG ATCGTCGGCT GTGAACTGGC GGTGGACTTC
ACAGATCAGG ATGCCAATGC CCGAAACGCG CTACCGCCTG CCCGAATCGT CCTGCTGGCG
ACGCGCGAAG CCGGCTATCG TAACTTGATG CGGTTGAACT CCCGCGCCTT CCTCGAAACA
CCGGAGCATT GCAGCCCTCA CGTCAATTGG GAGTGGCTAC GGGATGAAAA CGAAGGTCTG
ATCGCCTTGA CCGGAGGGCC CGAGGGTCCC GTGGCGCAGG CGTTCAACGC CGATCAGCCC
GCGCTTGCGA CGGCCCGCTG CGACCGGCTC GCCGGGATTT TCGGCGACCG GCTTTACGTG
GAGTTGCAGC GCCATGGGCT CGACAAGGAG CGGCGGGTCG AAGGTGCATT GATCGACCTC
GCCTATGCGA AGGGCCTTCC GCTGGTTGCG ACCAACGAGC CGTATTTTGC GACCTCCGAT
GATTATGAAG CCCATGACGC CTTGCTATGC ATCGCCGGCG GTCGCCTGGT TGCGGAGACC
GATCGCGAGC AATTGACGCC GGATCACCGC TTCAAGACCC GCGCGGAAAT GGCTGTCCTG
TTTGCTGACA TCCCGGAAGC GTTGTCGTCC ACGATGGAAA TCGCGGAACG TTGCGCGTTC
CGGCCGCGGA CGCGCAAGCC GATCCTTCCG CACTTTACGG TGGCCTCGGA CGCCGCCGCG
GCGGACGGGA AAAACGATGA AGCCGCCGAA TTGCGGCGAC AGGCGCAGGA GGGACTTGCG
AAGCGGCTGG CGGTGCATGG CGTCTCGACC GGAATGACGG AGCAGGACTA CAGCGCGCGC
CTTGACTTCG AACTCGATGT CATCACGCGC ATGAATTACG CGGGCTACTT CCTCATCGTC
GCGGACTTCA TCAAGCACGC CAAGTCCAAG GGAATTCCGG TTGGGCCGGG GCGGGGCTCC
GGCGCCGGCT CATTGGTGGC CTATGCGCTC ACGATCACCG ATCTCGATCC GATCCGCTTC
GGCCTGCTGT TCGAGCGCTT CCTCAATCCC GAACGGATAT CGATGCCGGA CTTCGATATC
GACTTCTGCC AGGAGCGGCG CGGGGAGGTC ATCGACTACG TGCAGAAGCG CTACGGCCGC
GACCAGGTCG CGCAGATCAT CACCTTTGGC ACGTTGCAGG CGCGGGGCGT GCTGCGCGAC
GTCGGCCGCG TCCTGCAGAT GCCTTACGGT CAGGTGGACA AGCTGACCAA GCTGGTGCCG
CAAAATCCCG CGGCGCCGGT CTCGCTGAAG CAGGCCATCG AGGGAGAGCC GAAACTACAG
GCGTTTCGTG ATGAGGACCC GGTGGTGGCG CGCGCGTTCG ATATCGCCCA GCGCCTCGAA
GGCCTGACGC GTCACGCCTC GACCCATGCG GCGGGCATCG TGATCGGCGA TCGGCCCTTG
AGCGAACTCG TGCCGCTGTA TCGCGATCCG AAGTCCGACA TGCCGGTGAC CCAGTTCAAC
ATGAAGTGGG TGGAGCCGGC GGGCCTCGTG AAGTTCGACT TCCTCGGCCT GAAGACGCTG
ACCGTTCTTG ACGTCGCGGT GAAGTTGCTG AAGCAGCGGG GGATCGACGT CGATCTTGCC
ACGCTGCCGC TTGACGACGC GGCCAGCTAC CAGATGCTGA CCCAGGGCGA CGTGGTCGGC
GTGTTTCAGG TTGAAAGCCA GGGCATGCGA CGGGCGCTGG TGGACATGCG TCCGGACCGA
TTCGAGGACA TCATCGCGCT GGTCGCGCTG TATCGACCGG GGCCGATGGC GAATATTCCG
ACCTATTGCG CGCGCAAGCA TGGCGAGGAG GAAGCGGAAT ATCTTCATCC GATGCTCGAG
CCGATCCTGA AGGAGACCTT CGGCGTTATC ATCTATCAGG AACAGGTGAT GCAGATCGCC
CAGGTCATGG CCGGCTACTC GCTCGGAGAC GCCGACCTGC TGCGGCGGGC GATGGGTAAG
AAGATTCGCT CGGAGATGGA GAAGCAGCGC GCGATCTTCG TGGCGGGCTC CGTCAACAAC
GGCGTTCCCC GAGGCCAGGC GGAAACGATC TTTGAGCTGC TGGCGAAGTT CGCTGATTAC
GGTTTCAACA AAAGCCACGC CGCGGCCTAT GCGCTGGTCT CCTATCAGAC CGCGTACATG
AAAGCGCACT TTCCCGTCGA GTTTCTGGCG GCATCGATGA CGCTCGATAT GAGCAACACC
GACAAGCTTT CGGAGTTTCG CGCGGAGGCC CAGCGCCTGG GCATCAAGGT CGAAGCGCCG
TCGATCAATC GCTCCGGTGC GACCTTCGAG GTGAAGGAAG GCGTCATCTG TTATGCGCTG
GCCGCGCTGA AAGGGGTCGG CGCGCACGCG GTCGAGCAGA TCGTCGAAGC TCGCAAGGCC
GGCATGTTCA CTTCGCTGGC GGATTTCGCC GCCAGGGTGC CGCCGCGCGC CATCAACAAG
CGCGTCATCG AAAGTCTCGC GGCCGCCGGA GCGTTTGAGG CGCTCGAGCC GAACCGCGCC
CGTGTGTTCG CCGGCGCCGA GGCGATCCTT GCTGCGTGCC AGCGCAGCCA CGAGGCGACG
ATGATCGGCC AGAATGACAT GTTCGGCGGT CTGGCGGACG CGCCAGACAT CATGCTGCCT
CGGGCGGAGC CCTGGCTGCC CGCCGATCGG CTGAGGCGCG AATATGAGGC GGTCGGATTT
TTCCTGTCGG GACATCCGCT CGACGATTAT GCGACAGCGC TCAAGCGGCT CCGCGTCCAG
TCGTGGGTCG AATTTTCCCG CGCGGTGAAG TCAGGTGCGA CCGCCGGCAA GGTGGCTGCG
ACGGTGGTTT CGCGGATGGA GCGGCGAACC AAGACGGGTA ACAAGATGGG CATCATCGGC
CTGTCCGATC CGAGCGGCCA TTTCGAGGCG GTGCTGTTCT CGGAAGGTCT CGCGCAGTTT
CGGGAGGTCC TTGAACCGGG GGCAGCGGTG CTGTTGCAAC TCGATGCGGA ATTGCAGGGA
GAGGAGGTGC GGGCGCGGGT GTCCCGTGCC GAACCGCTCG ACGATGCGGC GGCCAAGACG
CAGAAGGGAC TGCGGATTTT CCTGCGCGAT TCCAGGCCGC TCGAGTCGAT CGAAAAGCGT
CTTCAGGCGA ACGACAACGG GGATCCGGCT GGCGCCGCGA AAGTTCCCGC ATCGAGGCAG
GCTGGCGAGG GCGAGGTCTC GCTGGTGATG ATGCTGGACC TTGAGACCGA GGTGGAAATA
AAGCTTCCTG GCCGCTTTCG GGTTTCGCCT CAGATTGCCG GCGCGATCAA GGCGGTCACG
GGGGTCGTGG ATGTTCAGGC TATCTGA
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| Protein sequence | MTQKTLAAPA GFVHLHVHSA YSLLKGSIKI QKLAELARAD HQPALALTDT DNMFGALEFS
DKVAGLGIQP IVGCELAVDF TDQDANARNA LPPARIVLLA TREAGYRNLM RLNSRAFLET
PEHCSPHVNW EWLRDENEGL IALTGGPEGP VAQAFNADQP ALATARCDRL AGIFGDRLYV
ELQRHGLDKE RRVEGALIDL AYAKGLPLVA TNEPYFATSD DYEAHDALLC IAGGRLVAET
DREQLTPDHR FKTRAEMAVL FADIPEALSS TMEIAERCAF RPRTRKPILP HFTVASDAAA
ADGKNDEAAE LRRQAQEGLA KRLAVHGVST GMTEQDYSAR LDFELDVITR MNYAGYFLIV
ADFIKHAKSK GIPVGPGRGS GAGSLVAYAL TITDLDPIRF GLLFERFLNP ERISMPDFDI
DFCQERRGEV IDYVQKRYGR DQVAQIITFG TLQARGVLRD VGRVLQMPYG QVDKLTKLVP
QNPAAPVSLK QAIEGEPKLQ AFRDEDPVVA RAFDIAQRLE GLTRHASTHA AGIVIGDRPL
SELVPLYRDP KSDMPVTQFN MKWVEPAGLV KFDFLGLKTL TVLDVAVKLL KQRGIDVDLA
TLPLDDAASY QMLTQGDVVG VFQVESQGMR RALVDMRPDR FEDIIALVAL YRPGPMANIP
TYCARKHGEE EAEYLHPMLE PILKETFGVI IYQEQVMQIA QVMAGYSLGD ADLLRRAMGK
KIRSEMEKQR AIFVAGSVNN GVPRGQAETI FELLAKFADY GFNKSHAAAY ALVSYQTAYM
KAHFPVEFLA ASMTLDMSNT DKLSEFRAEA QRLGIKVEAP SINRSGATFE VKEGVICYAL
AALKGVGAHA VEQIVEARKA GMFTSLADFA ARVPPRAINK RVIESLAAAG AFEALEPNRA
RVFAGAEAIL AACQRSHEAT MIGQNDMFGG LADAPDIMLP RAEPWLPADR LRREYEAVGF
FLSGHPLDDY ATALKRLRVQ SWVEFSRAVK SGATAGKVAA TVVSRMERRT KTGNKMGIIG
LSDPSGHFEA VLFSEGLAQF REVLEPGAAV LLQLDAELQG EEVRARVSRA EPLDDAAAKT
QKGLRIFLRD SRPLESIEKR LQANDNGDPA GAAKVPASRQ AGEGEVSLVM MLDLETEVEI
KLPGRFRVSP QIAGAIKAVT GVVDVQAI
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