Gene Nwi_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1855 
Symbol 
ID3674504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2034808 
End bp2035566 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content63% 
IMG OID637713416 
Productundecaprenyl pyrophosphate synthase 
Protein accessionYP_318467 
Protein GI75676046 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.223709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0619844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAATG CCGTTGCGCC TGCAATCGAG GGATCGGACC AAGCCGATGC GCCGCTGCAT 
GTTGCGATCA TCATGGATGG CAACGGCCGA TGGGCGGCCG CTCGAGGACT GCCGCGCGCG
GAAGGCCATC GCCGCGGTGT CGAGGCGTTG AGGCGCGTGG TCCGTGCCGC GGGCGAGTTG
AACATCCTTT ATCTGACCAT TTTTTCCTTC AGTTCCGAGA ACTGGTCGCG GCCTCCGAGC
GAGATCAGCG ATCTCTTCGG CTTGCTGCGG AGGTTCGTCC GCAATGATCT GGCGACGCTG
CATCGCGACG GGGTGCGCGT GCGGGTTATC GGCGAGCGCG ACGGGCTGGA GCCGGATATC
TCTGCGCTGT TGACCGAGGC CGAGGAACTG ACGAAGAACA ACAACCGGCT TAATCTTGTC
GTTGCGTTCA ACTATGGTTC GCGACAAGAA ATCGCGAAAG CCGCCCGGCG GCTTGCGCGC
GAAGTCGCCG AGGGTAAGCG CGATCCGGCC ACGATCGACG CCGATACGCT GGGTCGATAT
CTCGACGCCC CGGACATTCC CGATCCTGAC CTGATCATTC GCACGAGCGG GGAGCAGCGG
CTGTCGAATT TCCTGATGTG GCAGGCGGCT TACAGCGAGT TTGTGTTCGT CCCGATCCAC
TGGCCGGATT TCGACAGGAC GGCGCTCGAA GGAGCGATCG CCGAATATGC AAGACGCGAA
CGCCGCTTCG GCGGGCTGGC CGCGAAAGCC GGATCATGA
 
Protein sequence
MSNAVAPAIE GSDQADAPLH VAIIMDGNGR WAAARGLPRA EGHRRGVEAL RRVVRAAGEL 
NILYLTIFSF SSENWSRPPS EISDLFGLLR RFVRNDLATL HRDGVRVRVI GERDGLEPDI
SALLTEAEEL TKNNNRLNLV VAFNYGSRQE IAKAARRLAR EVAEGKRDPA TIDADTLGRY
LDAPDIPDPD LIIRTSGEQR LSNFLMWQAA YSEFVFVPIH WPDFDRTALE GAIAEYARRE
RRFGGLAAKA GS