Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1838 |
Symbol | trpC |
ID | 3674763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 2012240 |
End bp | 2013034 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637713399 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_318450 |
Protein GI | 75676029 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGACA TCCTGACCAG GATCGAAACC TACAAGCGCG AGGAGATCGC GAGCGCAAAG CGTGCACGTC CCCTCGGCGA GGTCACGGCC GCCGCGAAGG CCGCCCCGCC GCCGCGCGGT TTTACCGATA CCATCCGCGC CAAACTCGCG CGAGGCGATT ACGCCCTGAT CGCCGAGATC AAGAAAGCCT CACCGTCCAA AGGACTGATC CGCGCCGACT TCGATCCGCC GTCGCTCGCC CGCGCCTATG AGGCCGGCGG CGCGGCCTGC CTCTCCGTTC TGACCGATGC GCCGTCGTTT CAGGGCCATC TCGATTTCAT GGTCGCCGCC CGCGCCGCGA CATCGCTGCC GGTGCTGCGC AAGGACTTCA TATTCGACAC CTATCAGGTC GTCGAGGCGC GGGCGCATGG AGCGGACTGC ATCCTGATCA TCATGGCCGC GCTCGATGAT GACGCTGCGA AAGACATCGA GGCGACCGCG CTCGATCTCG GCATGGATGT GCTGCTCGAA ATCCATAACC GCGAGGAACT GGATCGTGCG CTCAAGCTTC GCTCGCCGAT GATCGGCGTC AACAACCGCA ATCTGCGCAC CTTCGAGACG ACGCTCGAAA CCAGCGAAGG CCTGGCGCCG TACATCCCGA AAGAACGGCT CATGGTCGGC GAAAGCGGTA TCTTCACGCC CGCCGATCTC GCGCGGCTCG AACGGGTCGG CATCTCCACT TTTCTGGTCG GCGAAAGCCT GATGCGGCAA GCCGACGTCA CGGCCGCAAC GCGCACGCTG CTTAAACATG CGTAG
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Protein sequence | MADILTRIET YKREEIASAK RARPLGEVTA AAKAAPPPRG FTDTIRAKLA RGDYALIAEI KKASPSKGLI RADFDPPSLA RAYEAGGAAC LSVLTDAPSF QGHLDFMVAA RAATSLPVLR KDFIFDTYQV VEARAHGADC ILIIMAALDD DAAKDIEATA LDLGMDVLLE IHNREELDRA LKLRSPMIGV NNRNLRTFET TLETSEGLAP YIPKERLMVG ESGIFTPADL ARLERVGIST FLVGESLMRQ ADVTAATRTL LKHA
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