Gene Nwi_1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1805 
Symbol 
ID3677060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1977594 
End bp1978610 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content64% 
IMG OID637713367 
Productglycoside hydrolase family protein 
Protein accessionYP_318418 
Protein GI75675997 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.174272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.317979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC GCGCATTCAT CACGGGAGCG TCAGGCCTTG GCCTGACAAT GCAGGAGCGC 
GAATTCCTGC GCGCAGGGCG CCCGTGGGGT TTCATCCTGT TCAAGAGGAA CATCGACAAT
CCTCTGCAGG TTGCGCGCCT GGTTCAGGAG TTTCGAGAAG CTATCGAGGA TGGTGATGCA
CCCGTCCTGA TCGACCAGGA AGGCGGCCGC GTGCAGCGGT TGGGGCCGCC GCATTGGCCC
GTCTATCCGG CGGGCGCGAC GTTCGGCGCT CTCTATGATC GCGATCAGGC TGCGGGGTTG
GAGGCCGCGC GACTTGGCGC GCAACTGATC GCGGCCGATC TCGCCGATCT CGGAATCACG
GTCGACTGCC TGCCGCTGGC GGATGTTCCG GTGCCGGGCG CGGATGCCGT CATCGGTGAT
CGCGCTTATG GGACCGATCC CCTAAAGGTC GCGACCATCG CGCGGGCCGT CACCGAGGGG
CTGGAGCAGG GTGGTGTGTT GCCGGTTCTC AAGCATATTC CGGGTCACGG ACGGGCGACC
GCGGACACTC ATCACCGACT CCCGATCGTG GATACCTTGA AAGACGAGCT TGAGGCTGTT
GATTTCGCTG CGTTCCGTCC CCTTTCTGAT CTGCCGATGG CGATGACCGC ACATGTTGTG
TTCAGTGCGA TTGACGCCAC CCAACCGGCG ACAACATCTG CGACAATCAT CGAGCAGGTG
ATTCGCGGCT CGATCGGATT TCAGGGACTG TTGATGAGCG ATGACGTGTC GATGAATGCG
CTGACGGGAT CGATCGCCCA GCGGACGAGG GCGATCGTTG CGGCCGGGTG CGACATGGTT
TTGCACTGCA ATGGCCAATT GGACGAGATG CGGCAGGTCG CCAGCGAAGC TCCGGAATTG
TCGGGAGTCG CGCTGGACCG CGCCCGGCGG GCCCTCGCCG CGCGCAGGCC GCCGCAACCG
TTCGACCGCG AAGCGGCGCG CGCGAAACTC GACGCGTTGA CGGCGGCAAG CGCATGA
 
Protein sequence
MSTRAFITGA SGLGLTMQER EFLRAGRPWG FILFKRNIDN PLQVARLVQE FREAIEDGDA 
PVLIDQEGGR VQRLGPPHWP VYPAGATFGA LYDRDQAAGL EAARLGAQLI AADLADLGIT
VDCLPLADVP VPGADAVIGD RAYGTDPLKV ATIARAVTEG LEQGGVLPVL KHIPGHGRAT
ADTHHRLPIV DTLKDELEAV DFAAFRPLSD LPMAMTAHVV FSAIDATQPA TTSATIIEQV
IRGSIGFQGL LMSDDVSMNA LTGSIAQRTR AIVAAGCDMV LHCNGQLDEM RQVASEAPEL
SGVALDRARR ALAARRPPQP FDREAARAKL DALTAASA