Gene Nwi_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1801 
Symbol 
ID3677056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1972338 
End bp1975079 
Gene Length2742 bp 
Protein Length913 aa 
Translation table11 
GC content64% 
IMG OID637713363 
ProductDNA gyrase subunit A 
Protein accessionYP_318414 
Protein GI75675993 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.303162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.145926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCAGATA TCGAAGACAC TAAACCCGAG GAGCCGCCGG CGCCTTCGGG CATTCGGCCC 
GTTTCCATCC TCGAGGAGAT GAAACGCAGC TATCTCGATT ACGCGATGAG CGTGATCGTG
GCGCGGGCGC TGCCGGATGC GCGCGACGGC CTCAAGCCGG TCCACCGTCG CATTCTCTAC
GCGATGTATG AGAACGGCTT CGAGTGGAAC AAGCCCTACC GCAAATCCGC CCGCACTGTC
GGCGACGTCA TCGGTAAGTA CCATCCTCAC GGCGATCAAT CGGTTTATGA CGCGCTCGTG
CGGATGGCGC AGGATTTCTC GATGCGCGTG CCGCTGATCG ACGGACAGGG CAATTTCGGC
TCGGTGGACG GCGATATGGC GGCGGCGATG CGCTACACCG AATCCCGCCT CACCAAGATC
GCCCAATCGC TGCTCGACGA CATCGACAAG GACACCGTCG ATTTCCAGCC CAACTACGAT
AATAGCGAGA GAGAGCCGTC GGTTCTTCCG GCGAAATTTC CAAATCTTCT GGTCAACGGC
GCCGGCGGCA TCGCCGTCGG CATGGCGACC AACATCCCGC CGCACAATCT CGGCGAGGTC
ATCGACGCCT GCGTGGCGCT GATCGACGAT CCGGCGCTCG GCATCGACGA CCTCATCAAG
ATCATTCCGG GTCCGGACTT CCCGACCGGC GGCATCATCC TTGGACGGCA GGGCATCCGC
TCGGCCTATC ACCTCGGCCG GGGCTCGATC GTGATGCGCG GCAAAGTGTC GATCGATACG
ATCCGCAAGG ACCGCGAGGC GATCGTGGTT TCGGAGATCC CCTATCAGGT CAACAAGGCC
AGCATGGTCG AGCGCATCGC CGAGCTGGTG CGCGAGAAGA AGATCGACGG CATCTCGGAT
TTGCGTGACG AATCCGATCG CGAAGGGTTT CGCGTCGTCG TCGAGTTGAA GCGCGACGCC
GTTCCGGAGA TCGTGCTCAA TCAGCTTTAC AAGTACACGC CGCTGCAGAC CAACTTCGGC
GCCAACATGG TGGCGCTGGA TGCGGGCCGT CCGCAGGTCA TGAACCTGAA AGACCTGCTG
ACCCTGTTTA TCGCGTTCCG CGAACAGGTC GTCACGCGCC GCACCAAGTT CCTGCTCAAC
AAGGCCCGCG ATCGCGCCCA CATCCTGGTC GGTCTCGCGA TCGCCGTCGC CAACATCGAC
GAGATCATCC GCGTGATCAG GGAGTCGCCG GATCCCAACG CCGCGCGCGA GACGTTGATG
TCGCGCGACT GGCCGGCGAA GGATGTCGCG GCGATGATCA CGCTGATCGA CGATCCGCGC
CACCGCGTGT CGCCGGACGG CACGGCGCGG CTGTCGATGG AGCAGGCGAA AGCCATTCTC
GATCTGCGTC TGCAGCGCCT GACCGCGCTC GGCCGCGAGG AAATCTCGGA GGAACTCGAC
AAGCTCGCCA TCGAGATCGC CGACTATCTG GACATCCTGC GGTCGCGCGC GCGCGTACAG
GCGATCATCA AGACCGAGCT TGGCGCGGTG AAGTCCGAAT TCGCCACCCC GCGCAGGACG
GTTATCGTCG AGCAGGAAGG GGAGGTCGAG GACGAGGACC TGATCCAGCG CGAGGATATG
GTCGTGACCG TCTCGCATGC AGGCTATGTC AAGCGGGTGC CGCTATCGAC CTACCGCGCG
CAGAAGCGTG GCGGCAAAGG CCGCTCCGGA ATGCAGACGA GGGACGAGGA TTTCGTCAGC
CGGCTGTTCG TCGCCTCGAC TCATACGCCG GTGCTGTTCT TTTCGTCGCG CGGACAGGTC
TACAAGGAAA AGGTCTGGCG GCTGCCGATG GCGGCTCCCA ATGCCCGCGG CAAGGCGCTG
ATCAACATCC TGCCGCTCGA CCAGGGCGAG CGTATCACCA CCATCATGCC GCTGCCGGAG
GATGAATCGT CCTGGGCCGA CCTGGACGTC ATGTTCGCGA CCACCAGCGG AACGGTCCGC
CGCAACAAGC TCTCCGATTT CGTCGATGTC CGGCGTTCCG GCATTATCGC GATGAAGCTG
GGTGAGGGCG AGTCGATCGT CGACGTGCAG ATCTGCACCG AGCGCGACGA CGTGCTGCTG
ACCGCCGCGG GCGGTCAGTG CATCCGGTTC CCCGTCACCG ACGTGCGCGT GTTCTCGGGC
CGGACATCGA TGGGAGTGCG CGGCATCGCG CTGGCCAAGG GCGATCGGGT TATCTCGCTG
TCGATCCTGC ATCACTTCGA CGCCACGCCG GCCGAACGCG CGGCGTATCT TAAGCAGTCC
GGCGCGATCC GCCGCGCGGC GACCGGCGAG GATATCGAGC CGGAGGAGGC GACGCCCGAG
GCCGACGAGG CCGCGCATAC TGATCTCTCG CTGCCCGAAG GGCGTTATGT GGAGATGGGC
GCCGCCGAGC AGTTCGTGCT CACCGTCACG ACCTATGGCT ATGGCAAGCG ATCGTCGTCG
TTCGAATTCA GGGTTTCAGG ACGCGGCGGC AAGGGCATTC GCGCGACCGA TCCGACCAAG
CTTGGCGAGA TCGGACATCT CGTCGCTGGA TTCCCGGTCG AGATGTCGGA CCAGATCATG
CTGGTGAGCG ACGGCGGGCA GTTGATCCGG GTGCCGGTGG AAGGCATCCG CATCACCAGC
CGGGCCTCCA AGGGCGTCCG CGTGTTCAAC ACGGCGGATG GCGAGCATGT GGTGTCGGTC
GAACATATTC GAGAGGACGG CGAGAACGGC AACGGCGGAT AA
 
Protein sequence
MSDIEDTKPE EPPAPSGIRP VSILEEMKRS YLDYAMSVIV ARALPDARDG LKPVHRRILY 
AMYENGFEWN KPYRKSARTV GDVIGKYHPH GDQSVYDALV RMAQDFSMRV PLIDGQGNFG
SVDGDMAAAM RYTESRLTKI AQSLLDDIDK DTVDFQPNYD NSEREPSVLP AKFPNLLVNG
AGGIAVGMAT NIPPHNLGEV IDACVALIDD PALGIDDLIK IIPGPDFPTG GIILGRQGIR
SAYHLGRGSI VMRGKVSIDT IRKDREAIVV SEIPYQVNKA SMVERIAELV REKKIDGISD
LRDESDREGF RVVVELKRDA VPEIVLNQLY KYTPLQTNFG ANMVALDAGR PQVMNLKDLL
TLFIAFREQV VTRRTKFLLN KARDRAHILV GLAIAVANID EIIRVIRESP DPNAARETLM
SRDWPAKDVA AMITLIDDPR HRVSPDGTAR LSMEQAKAIL DLRLQRLTAL GREEISEELD
KLAIEIADYL DILRSRARVQ AIIKTELGAV KSEFATPRRT VIVEQEGEVE DEDLIQREDM
VVTVSHAGYV KRVPLSTYRA QKRGGKGRSG MQTRDEDFVS RLFVASTHTP VLFFSSRGQV
YKEKVWRLPM AAPNARGKAL INILPLDQGE RITTIMPLPE DESSWADLDV MFATTSGTVR
RNKLSDFVDV RRSGIIAMKL GEGESIVDVQ ICTERDDVLL TAAGGQCIRF PVTDVRVFSG
RTSMGVRGIA LAKGDRVISL SILHHFDATP AERAAYLKQS GAIRRAATGE DIEPEEATPE
ADEAAHTDLS LPEGRYVEMG AAEQFVLTVT TYGYGKRSSS FEFRVSGRGG KGIRATDPTK
LGEIGHLVAG FPVEMSDQIM LVSDGGQLIR VPVEGIRITS RASKGVRVFN TADGEHVVSV
EHIREDGENG NGG