Gene Nwi_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1797 
Symbol 
ID3677052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1969868 
End bp1970332 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content62% 
IMG OID637713359 
Productpeptidyl-prolyl cis-trans isomerase, cyclophilin type 
Protein accessionYP_318410 
Protein GI75675989 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00576521 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.115354 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA GCGAAAACAC TTTGATCCTC GAAACCACCC AGGGACCCGT GACGATCGAG 
ATGCGCCCCG ATCTTGCTCC CGGCCACGTC GCGCGGATCA AGGAACTGGT GCGTGAAGGG
TTCTACGACG GCATCGTATT TCACCGCGTG ATCGACGGCT TCATGGCGCA GACCGGATGC
CCGCAAGGCA CCGGCATGGG CGGCTCCGGC CAGAAACTGA AGGCTGAGTT CAACAGGGAG
CCGCATGTGC GCGGCACCGC GTCCATGGCG CGGGCGCAAA GCCCGGATTC GGGCGACAGC
CAGTTCTTCA TCTGCTTCGA CAATGCATCC TTCCTGGACG GCCAGTACAC CGTCTGGGGC
AAGGTGATCG AAGGCATGGA GAATGTCGAC AAGATCAAGC GCGGCGAGCC GGTGCAAAAT
CCCGACAAGA TCGTCAAGGC CAGGATAGCG GCGGACGCGG CCTAG
 
Protein sequence
MADSENTLIL ETTQGPVTIE MRPDLAPGHV ARIKELVREG FYDGIVFHRV IDGFMAQTGC 
PQGTGMGGSG QKLKAEFNRE PHVRGTASMA RAQSPDSGDS QFFICFDNAS FLDGQYTVWG
KVIEGMENVD KIKRGEPVQN PDKIVKARIA ADAA