Gene Nwi_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1770 
Symbol 
ID3675650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1940841 
End bp1941242 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content59% 
IMG OID637713330 
Productpreprotein translocase subunit, YajC 
Protein accessionYP_318383 
Protein GI75675962 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.131308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00406868 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTCATTA CCCCCGCCTT TGCTCAGGCC GCCGGCTCCG GCGACGCCAA CAGCCTGTTG 
ATGTCGCTGC TGCCGTTCGC GTTGATCTTC ATCATCATGT ATTTCCTGAT CATCCGGCCC
CAGCAGAAGA AGGCGAAAGA GCACGCCGAA CTGGTGAAGA ACATTCGTCG CGGTGACACC
GTCATCACAT CGAGCGGCCT GGTCGGAAAG GTCACCAAGG TGGTGGATGA CGAGCAGATC
GAGTTCGAAA TCGCTGATGG CGTCCGGGTA CGGCAGATGC GTCAGATGAT TTCGATCGTT
CGCGCGAAGG GCGAACCCGC CAAAGGTGAA GCGGCAAAGG GAGCCGCCAA AGCCGATGGC
GCTAAAGGAA ATGGCTCCAG GGACGACACC GCCGCGAGCT AG
 
Protein sequence
MFITPAFAQA AGSGDANSLL MSLLPFALIF IIMYFLIIRP QQKKAKEHAE LVKNIRRGDT 
VITSSGLVGK VTKVVDDEQI EFEIADGVRV RQMRQMISIV RAKGEPAKGE AAKGAAKADG
AKGNGSRDDT AAS