| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1734 |
|---|
| Symbol | |
|---|
| ID | 3675139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 1895378 |
|---|
| End bp | 1896088 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637713293 |
|---|
| Product | FecI like protein |
|---|
| Protein accession | YP_318347 |
|---|
| Protein GI | 75675926 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.112021 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGGTTGC GGAAGAATTT TGGACGCCAT AAACGATTGG AAGCCGACCA CCGCGACGGT
GACAGCGTGT CGGCGTCCTC ATCCTTGGCT AGTTCACGTT CGCATCATGA TCCCTTTCGC
TTTCGTTCCC GTTTGTCCGC AGCCGCTGTC GCCGGGCGAA TCCGTTTGCG GGCAAGGGAT
GGCTTCCGGC TGGCGTTCGG GGCGCGCATG AGTTGGGATC TTCACAGGCT GTTCTTACGC
CATGCGCGCG ACATCACCGC GGCGCTGCGG CGTCGGGGAC TGAGCGAGGA AACGGCTGCG
GACATCACCC AGGATACGTT CGTCAAGGTT CTCGTCTCGC CGCCTGGCAG GTCGGTGACG
GTTCATAACC CGGCGGCCTA TCTGTTTCGG GTGGCGCGCA ATCTCGGCAT CGATCACCAG
CGCCGCGAGC GGGTGCTGCG TCGGGTCGAA ATGTCGGCCG AGGATTTTGC AGCGATCGTC
GACCCCACGC CGTCTCCGGA ATCCGCCGTC TATGACCGCC AGAAGCTGGC GCTGACCAGG
GCCGCGCTCG CCGAGTTGCC CGAGCGTACC CGCGTCGCCT TCGAAATGCA TCGGCTCGAT
GAAATGACGA TTGCCGAGGT CGCGGCCGAA CTCGGTCTTT CGACCTCCCG CGTCTGGTCG
CTGATCCGGG ACGCCTACGA TCATATCGAT GCCCGGCTGA CCGGCCTCTG A
|
|---|
| Protein sequence | MRLRKNFGRH KRLEADHRDG DSVSASSSLA SSRSHHDPFR FRSRLSAAAV AGRIRLRARD
GFRLAFGARM SWDLHRLFLR HARDITAALR RRGLSEETAA DITQDTFVKV LVSPPGRSVT
VHNPAAYLFR VARNLGIDHQ RRERVLRRVE MSAEDFAAIV DPTPSPESAV YDRQKLALTR
AALAELPERT RVAFEMHRLD EMTIAEVAAE LGLSTSRVWS LIRDAYDHID ARLTGL
|
|---|
| |