Gene Nwi_1688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1688 
Symbol 
ID3674542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1841145 
End bp1841882 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content62% 
IMG OID637713246 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_318301 
Protein GI75675880 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACT TGACCGATAG GACCGCGCTT GTGACAGGCG CGACCGGCGG CATCGGCGGC 
GCCATTGCGA AGGCGCTACA CGCGCAGGGG GCGACGGTCG CGATTTCCGG TACGCGCCGG
GAAGTGCTGG AGACACTGGC GGATACGCTT GGCGAGCGCG TTCATGTGCT GCCCTGTAAC
CTGTCGGATA CGGCGGCGGT CGAGGCACTG GTGCCGGATG CCGAGAAGGC GATGGGGAAG
GTCGATATTC TCGTCGCCAA TGCCGGCGTC ACGCGGGACA ACCTGTTTGT GCAACTGCGT
GACGAGGATT GGGACGACGT GATCAGGATC AATCTGACCG CGACATTCCG CCTTGCGCGC
GCGGCGACAA AACTGATGAT GCGTAAACGC TTCGGCCGCA TCATCGCCAT CACCTCGGTG
GTCGGCGTTA CCGGAAATCC GGGGCAGGGA AACTACACCG CATCAAAGGC CGGACTGATC
GGCATGATCA AAACCCTGGG CGCGGAATAT GCAAAGCGCG GGGTGACGGC CAACTGCATT
GCACCCGGAT TCATCGCAAC GGCGATGACC GACGCGCTGA ACGAAAAGCA GCGAGAGACG
ATTCTGACGA AGGTCCCGGC GGCCCGCCTC GGAACTCCGG AAGATATCGC CGCGGCGGCG
GTCTATCTGA GTTCGAACGA AGCGGCCTAC GTGACCGGAC AGACGATCCA TGTCAACGGC
GGAATGGCAA TGATTTGA
 
Protein sequence
MFDLTDRTAL VTGATGGIGG AIAKALHAQG ATVAISGTRR EVLETLADTL GERVHVLPCN 
LSDTAAVEAL VPDAEKAMGK VDILVANAGV TRDNLFVQLR DEDWDDVIRI NLTATFRLAR
AATKLMMRKR FGRIIAITSV VGVTGNPGQG NYTASKAGLI GMIKTLGAEY AKRGVTANCI
APGFIATAMT DALNEKQRET ILTKVPAARL GTPEDIAAAA VYLSSNEAAY VTGQTIHVNG
GMAMI