Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1645 |
Symbol | |
ID | 3675437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 1787070 |
End bp | 1788911 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637713203 |
Product | RecJ exonuclease |
Protein accession | YP_318258 |
Protein GI | 75675837 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.79109 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTGC CAGCCTCCGC ATTGCCTGTC GAAGCGCCTG ACGCCTTTCT TGGCGTATCG CATTCAGCGA CGGGCCGTCT GTGGCGCGAT CGCCTCGATC CGCGGGGCGC GGCGCGCGCG CTGGCGATCG CACAACGGCA TCAGTTGCCG GAGATGCTGG CGCGGGTGAT TGCCGGACGC GGCGTCGACA TCGATGCGGT CACGGATTTT CTCGACCCCA CCATCCGCCG GCTGATGCCC GATCCTTTCA CCGTGACGCA GATGGAGACC GCCGCGCAGC GGATCGCGGA TGCCGCGATG CGCGGTGAGA CAGTCGCGAT CTTCGGTGAT TATGACGTCG ATGGCGCGAC CTCGGCGGCG TTACTCGCCT GGCATCTGCG GCATTGCGGA CTTGACCCGC TGATCCATAT CCCCGACCGC ATTTTCGAAG GCTATGGTCC GAATGTCGAT GCGGTCGACG CGCTCGCGGG CAGGGGCGCG ACCTTGCTGG TGACCGTGGA CTGCGGCACG ACCAGTATCG AGCCGCTGGC GGTTGCAAGG CAGCGGGGCA TGTCGGTCGT CGTGATCGAC CATCACCAAT GCGGCGACGA CCTGCCCGAG GTCGAGGCGC TGGTTAATCC GAACCGCCCC GACGATCTTT CCGGCCTGGG CCATCTCGCG GCCGTCGGTC TCGTTTTTAT CACGCTGGTC GCGCTGAACC GCGAGCTCCG CCAGCGCGGT TTCTGGAGCC GCGAGCGGCC CGAACCGAAT CTCCTGGACA TGCTGCATCA CGTCGCGCTC GGAACGGTGG CCGACGTCGC GCCGCTGACC GGTCTCAACC GCGCTTTCGT GGCGAAGGGA TTGATCGCGC TGCGCCGCCG CGATCATGTC GGCCACACCG CCCTGATGGA TGTGGCGCGG CTGAGCGGCC CGCCGGAAGC CTGGCATCTC GGCTTCATGC TGGGACCGCG CATCAACGCC GGCGGCCGGA TCGGGCGCGC CGACCTCGGG GTACGGCTGC TGCTGGAAGG CGATGTGTCC GAAGCCGCGC GGATCGCCGC CGAACTCGAT CGTCTCAATG CGGAACGCCG CGTGATCGAA CAGACGGCCG AAGCGCAGGC CGAAGCCGAG GCGCTGGCCT CGCTCGGTCT GGAGGACAAG GGCTCCGTCA TCGTCACCGC CTCCGAGGGC TGGCATCCCG GCGTGGTCGG TCTCGTGGCG TCGCGGCTGA AGGACAAATT CGCGCGGCCA GCTTTTGTTG TCGCGCTGGA GCCCGGCGGC ATCGGGACCG GATCGGGCCG CTCCATCGGC GGCGTCGATC TCGGCAAGGC GGTGCGGCGG GCCGTGACGG ACGGCGTGCT GCTCAAGGGC GGCGGCCATG CCATGGCGGC TGGCGTGACG TTGCGGAAAG AGCAGCTTGC GGAATTCCGC GCCTATATGG AAACGGCGCT CGCCGCCGAT GTCGCGCGGT CGCGCCATGT CCGCAAGCTT TTCATCGATG GCGCGGTCAG CGCGCGGGCG GCGACGCCCG AATTCGTGGC GACGCTCAAT CGCGCGGGAC CGTTCGGCGC GGGCAACCCC GAGCCGGTGG TGGCGTTGCC ATCGCACCAG TTGATCCATG CCGACGAGAT CGGGCAGGCG CATCTCCGGT TACGGTTCAG GTCCGGTGAC GGCGCGATCG TGAACGGCAT CGCGTTTCGC GCGGTCGGTC AGCCGCTGGG CAACGCTCTC GCCCGGATGC GGGGCCAGCC GTTGCATGTC GCGGGATCGC TGGCGGTGGA CCGCTGGCAG GGCGCGGAGC GCGTGCAGTT GCGCGTGGTG GATGTCGCGG CGCCAGATCC GGGACCGAAG ACAATTCGTT AA
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Protein sequence | MTLPASALPV EAPDAFLGVS HSATGRLWRD RLDPRGAARA LAIAQRHQLP EMLARVIAGR GVDIDAVTDF LDPTIRRLMP DPFTVTQMET AAQRIADAAM RGETVAIFGD YDVDGATSAA LLAWHLRHCG LDPLIHIPDR IFEGYGPNVD AVDALAGRGA TLLVTVDCGT TSIEPLAVAR QRGMSVVVID HHQCGDDLPE VEALVNPNRP DDLSGLGHLA AVGLVFITLV ALNRELRQRG FWSRERPEPN LLDMLHHVAL GTVADVAPLT GLNRAFVAKG LIALRRRDHV GHTALMDVAR LSGPPEAWHL GFMLGPRINA GGRIGRADLG VRLLLEGDVS EAARIAAELD RLNAERRVIE QTAEAQAEAE ALASLGLEDK GSVIVTASEG WHPGVVGLVA SRLKDKFARP AFVVALEPGG IGTGSGRSIG GVDLGKAVRR AVTDGVLLKG GGHAMAAGVT LRKEQLAEFR AYMETALAAD VARSRHVRKL FIDGAVSARA ATPEFVATLN RAGPFGAGNP EPVVALPSHQ LIHADEIGQA HLRLRFRSGD GAIVNGIAFR AVGQPLGNAL ARMRGQPLHV AGSLAVDRWQ GAERVQLRVV DVAAPDPGPK TIR
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