Gene Nwi_1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1626 
Symbol 
ID3675418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1770894 
End bp1771391 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content58% 
IMG OID637713184 
Productpeptidase U35, phage prohead HK97 
Protein accessionYP_318239 
Protein GI75675818 
COG category[R] General function prediction only 
COG ID[COG3740] Phage head maturation protease 
TIGRFAM ID[TIGR01543] phage prohead protease, HK97 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.468737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.616924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGGC TCGAAATCAA GGCATCCCTG AACGTCTCCG ACACTGGCGA AATTGTCGGC 
AACGCATGGC CCTTTGCGGA GCCGGATCGT GTTGGCGACA TCATCACCAA GGGTGCATTT
GGCGAAATCT CTCCCGATCT CGGAATGCTC TATCAGCACA ATCCCGCCGA CCTGATCGGA
ACGTGGACCG AAGTCAAAGC GACCGACGAA GGGTTGATGG TCAAGGGGCA ACTGCACCTC
GATCAACCCC GCGCACGCTC GGTGAGGAGC CTGGTTCTAA AGGGTCTCGT GTCTGATCTC
TCGATCGGAT TCCGCACTAA GTCGTCCCGC AAGGAAGGTC GCAACCGAAT TATCGACGCG
CTCGATCTCG CTGAAATCAG CCTTGTCAGA AGTGGGTCGC ACCCCCGTGC GCGGATCACG
TCCGCAAAGT CTTTTGACGA AGCCGCAGCC ATTGCCGCGG TCATTAACCG GGCCGCTGCG
GCCCTAGCAT TGAGGTAA
 
Protein sequence
MDRLEIKASL NVSDTGEIVG NAWPFAEPDR VGDIITKGAF GEISPDLGML YQHNPADLIG 
TWTEVKATDE GLMVKGQLHL DQPRARSVRS LVLKGLVSDL SIGFRTKSSR KEGRNRIIDA
LDLAEISLVR SGSHPRARIT SAKSFDEAAA IAAVINRAAA ALALR