Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1509 |
Symbol | |
ID | 3675912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 1637384 |
End bp | 1638118 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637713062 |
Product | invasion associated locus B |
Protein accession | YP_318122 |
Protein GI | 75675701 |
COG category | [R] General function prediction only |
COG ID | [COG5342] Invasion protein B, involved in pathogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.138245 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0458793 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTTC GTCTCTTGAC CACGTCCGCT TTGCATCGCG GACGGGCCTT CGCCCTGTTC GCCGCGGTGA CGCTCGTGGC CGTTCCATTT GCGTCGGACG CTCCCGCCCA GCAAGCGCCC CCCCCCAAAG GCAAGGCGGC TCCAGCAAAG GGAGCGCAGC AGGCTCCGGC GGCAAACCAG GCGGCGCCAG CCGACCAGCA GGTGCAACTG ATCTATGCCC CCTGGACCAA GTTCTGCCTG AAAGGCCAGG ATGCGAAAGC CAAGCAGGTA TGTTTCACCG GCAAGGACGG ACGAATCGAA TCCGGCCAGC CCGTAATCGC GGCGGTCATC ATCGAGCCCG AAGGCGAGCC CAAGAAGATT CTCCGCGTAA CGCTGCCGCT CGGGATGCAA CTCGTCCACG GAACGCGCAT CATCGTCGAT AGCAACCCGC CGCAGCAGAG TCCCTACGTG ATCTGCTTCG CCAATGGCTG CATGTCGGAT TATGAGTTGT CAGCGGATAT GCTCGGACAC CTGAAGAAGG GCCAGAATCT GATTGTTCAG GCAATCAATT CCAACGGCGC GCCGCTGACG CTGCCGCTTC CGCTGGCTGA GTTCGCGAAA GCCTATGACG GCCCGCCGAC CGACCCCAAG GTGTTCGAGG AAACCCAGAA GAAGCTGCAG GAAGAACTGC AGAAGCGGGC TGCCGAAGCG CGCGCGAAGC TCGAAGCCAC CCAACAGGGT ACCGCTAAAC AGTAG
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Protein sequence | MNFRLLTTSA LHRGRAFALF AAVTLVAVPF ASDAPAQQAP PPKGKAAPAK GAQQAPAANQ AAPADQQVQL IYAPWTKFCL KGQDAKAKQV CFTGKDGRIE SGQPVIAAVI IEPEGEPKKI LRVTLPLGMQ LVHGTRIIVD SNPPQQSPYV ICFANGCMSD YELSADMLGH LKKGQNLIVQ AINSNGAPLT LPLPLAEFAK AYDGPPTDPK VFEETQKKLQ EELQKRAAEA RAKLEATQQG TAKQ
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