Gene Nwi_1509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1509 
Symbol 
ID3675912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1637384 
End bp1638118 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content62% 
IMG OID637713062 
Productinvasion associated locus B 
Protein accessionYP_318122 
Protein GI75675701 
COG category[R] General function prediction only 
COG ID[COG5342] Invasion protein B, involved in pathogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.138245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0458793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTC GTCTCTTGAC CACGTCCGCT TTGCATCGCG GACGGGCCTT CGCCCTGTTC 
GCCGCGGTGA CGCTCGTGGC CGTTCCATTT GCGTCGGACG CTCCCGCCCA GCAAGCGCCC
CCCCCCAAAG GCAAGGCGGC TCCAGCAAAG GGAGCGCAGC AGGCTCCGGC GGCAAACCAG
GCGGCGCCAG CCGACCAGCA GGTGCAACTG ATCTATGCCC CCTGGACCAA GTTCTGCCTG
AAAGGCCAGG ATGCGAAAGC CAAGCAGGTA TGTTTCACCG GCAAGGACGG ACGAATCGAA
TCCGGCCAGC CCGTAATCGC GGCGGTCATC ATCGAGCCCG AAGGCGAGCC CAAGAAGATT
CTCCGCGTAA CGCTGCCGCT CGGGATGCAA CTCGTCCACG GAACGCGCAT CATCGTCGAT
AGCAACCCGC CGCAGCAGAG TCCCTACGTG ATCTGCTTCG CCAATGGCTG CATGTCGGAT
TATGAGTTGT CAGCGGATAT GCTCGGACAC CTGAAGAAGG GCCAGAATCT GATTGTTCAG
GCAATCAATT CCAACGGCGC GCCGCTGACG CTGCCGCTTC CGCTGGCTGA GTTCGCGAAA
GCCTATGACG GCCCGCCGAC CGACCCCAAG GTGTTCGAGG AAACCCAGAA GAAGCTGCAG
GAAGAACTGC AGAAGCGGGC TGCCGAAGCG CGCGCGAAGC TCGAAGCCAC CCAACAGGGT
ACCGCTAAAC AGTAG
 
Protein sequence
MNFRLLTTSA LHRGRAFALF AAVTLVAVPF ASDAPAQQAP PPKGKAAPAK GAQQAPAANQ 
AAPADQQVQL IYAPWTKFCL KGQDAKAKQV CFTGKDGRIE SGQPVIAAVI IEPEGEPKKI
LRVTLPLGMQ LVHGTRIIVD SNPPQQSPYV ICFANGCMSD YELSADMLGH LKKGQNLIVQ
AINSNGAPLT LPLPLAEFAK AYDGPPTDPK VFEETQKKLQ EELQKRAAEA RAKLEATQQG
TAKQ