| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1434 |
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| Symbol | |
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| ID | 3677176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 1560268 |
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| End bp | 1561740 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637712986 |
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| Product | type I secretion outer membrane protein, TolC |
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| Protein accession | YP_318047 |
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| Protein GI | 75675626 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.44207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.675589 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGC GTAGAGGCTC GGCCTTGTTT ACGTCTTGTG ATATGAAGAA TGGAATTCTG
CGGATGGGTG GTGTGAGACT GGCGGCGGCG GCCGCCGTGT TGGCTTTTAT GACTGCGTGG
CCGGGGACGG CGACACGGGT CTCCGCCGAC ACCATCGAAT CTGCATTGGT GCGTGCCTAC
CAGAGCAACC CTCAGCTCAA TGCCCAGCGC GCCGCTGTTC GTGCGACCGA CGAGAGCGTG
CCCCAGGCCC TTTCGGGCTA TCGGCCCAGA GTCGCCGTAA CCACGAGCGG CGGCTTTCAG
CATACCGACA TGACATTTAG CCAGGGTCTG CCGGGTCAGG GAAACGTCCT AGGGAGGATC
AAGGGTAATC AGACACCGGT AGCTATCGGC GCCACGGTTT CACAGACGCT GTTCGACGGA
TTCCAGGCCG CCAACAGGAC CCGTGCGGCG GAAGGACAGG TTTCGGCGGC GCGCGAGGGG
CTAAGGGTCC TCGAGCAGAC CGTACTGCTC GCTGCTGCGA CCATCTATAT GGATTATCTG
CGGGATGCCG CCATTGTGGA GGTTCAGCGC AGCAATGTTC GCGTCCTCGA GGAGACGCTC
AAGCAGACGC GTGATCGTTT CAATGTCGGC GAGGTGACCC GCACCGACGT GGCGCAGTCC
GAGGCCCAAC TCGCCGCCGG ACGCACCCAG CTTATGGCCA CTGAATCCAC CCTCATAACC
ACGCGCGCGA ATTATCGGCG CATTGTCGGC AACGAACCGG GGCAGTTGGC GCCGGGCTCG
CCCGTTGATC GCTTTCTGCC GTCAACGCTC GCGCGTTCCG TGGATCTCGC CCTTACCCAA
AATCCCAATG TGACCGCGGC GATGTATGGC ATCGACGTCA GCCATTTGCA GGTCAAGGTT
GCGGAGGGCG TGCTGTTTCC GACCGTGACC CTTCAGGCCA ACGTGCAGAA GGGGTACGAT
CAGCAGCTCA CATTGCCGAC TCAGTTCGCC GCATCGGCGA TCGCGCAGGT GTCGGTGCCG
ATCTATCAGG GCGGCGCTGA ATATTCGCTG ATCCGCCAGT CCAAGGAAAC GCTGGCGCAA
CAACGTCTCA ACCTCGAGCA GGTTCGCAAT CAGGCGCGCG CCAGCACTGT GCAGGCGTGG
GGCCAGCTCG AAGCAACCAA GGTGCAGGTG AAGTCGGCGC AGGCGCAGGT CGAGGCTTCG
GAGATCGCGG TCAACGGCAT TCGCGAGGAA GCCAAGGCCG GTCAACGAAC CACGTTCGAC
GTGCTGGTCG CGCAACAAGC CCTCGTCAGC GCCCGAGTGG CCCTGGTGAC GGCTCAACAC
GATCGCGTGG TCGCCTCCTA TGCGGTTTTG AATGCCGTTG GCCGGTTGAC GCCGCAGGTA
CTTAAGCTGA ACACCACGGT GTACGATCCC AGTGTCCACT ATCATCAGGT TCGCGACAGC
TGGATTGGCC TGCGTACGCC GGATGGACAG TAG
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| Protein sequence | MIRRRGSALF TSCDMKNGIL RMGGVRLAAA AAVLAFMTAW PGTATRVSAD TIESALVRAY
QSNPQLNAQR AAVRATDESV PQALSGYRPR VAVTTSGGFQ HTDMTFSQGL PGQGNVLGRI
KGNQTPVAIG ATVSQTLFDG FQAANRTRAA EGQVSAAREG LRVLEQTVLL AAATIYMDYL
RDAAIVEVQR SNVRVLEETL KQTRDRFNVG EVTRTDVAQS EAQLAAGRTQ LMATESTLIT
TRANYRRIVG NEPGQLAPGS PVDRFLPSTL ARSVDLALTQ NPNVTAAMYG IDVSHLQVKV
AEGVLFPTVT LQANVQKGYD QQLTLPTQFA ASAIAQVSVP IYQGGAEYSL IRQSKETLAQ
QRLNLEQVRN QARASTVQAW GQLEATKVQV KSAQAQVEAS EIAVNGIREE AKAGQRTTFD
VLVAQQALVS ARVALVTAQH DRVVASYAVL NAVGRLTPQV LKLNTTVYDP SVHYHQVRDS
WIGLRTPDGQ
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