| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1365 |
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| Symbol | rplD |
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| ID | 3674777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 1500849 |
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| End bp | 1501469 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637712916 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_317978 |
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| Protein GI | 75675557 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.65413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.580974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACTGA ACGTTACCAC CCTCGAAGGC AAGGCTGCGG GTTCGGTTCA TCTGTCGGAC
GGAATCTTCG GGCTCGAGCC TCGCAAGGAT CTCATTCAGC GTTGCGTGAA CTGGCAGCTT
GCCAAGAGTC AGGCGGGCAC CCACAAGACC AAGGGACGCG CGGAAATCTG GCGCACCGGC
AAGAAGCTGT TCAAGCAGAA GGGCACGGGC AACGCCCGTC ACGGCTCGGC CCGCGCGCCC
CAGTTCCGAG GCGGCGGCCG TGCGTTTGGG CCGGTCGTTC GCAGTCATGC GCATGATCTG
CCCAAGAAGG TGCGCGCGCT GGCGCTGCGC CATGCGCTTT CGGCGAAGGC CAAGGATGGC
GGTTTGATCG TTATCGACAG CGTCGAGCTG AAAGAGGCCA AGACCAAGGC TCTGATGGGG
CATTTTTCGA GCCTCGGTCT GACCAGTGCG CTGATCATCG ATGGCGCGCA GGTTCATGCC
GGGTTCGCAA CCGCCGCGCG CAACATTCCG AACATCGACG TGCTGCCGAT CCAGGGCATC
AACGTCTACG ACATTCTGCG CCGTCAGAAG CTGGTGTTGA CCAAGGCGGC GGTTGATGCG
TTGGAGGCGC GTTTCAAATG A
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| Protein sequence | MELNVTTLEG KAAGSVHLSD GIFGLEPRKD LIQRCVNWQL AKSQAGTHKT KGRAEIWRTG
KKLFKQKGTG NARHGSARAP QFRGGGRAFG PVVRSHAHDL PKKVRALALR HALSAKAKDG
GLIVIDSVEL KEAKTKALMG HFSSLGLTSA LIIDGAQVHA GFATAARNIP NIDVLPIQGI
NVYDILRRQK LVLTKAAVDA LEARFK
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