Gene Nwi_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1337 
Symbol 
ID3674450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1466308 
End bp1467033 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content64% 
IMG OID637712887 
Productputative outer membrane protein 
Protein accessionYP_317950 
Protein GI75675529 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT TTTTGCTCAC GGCCGTTGTG GCTACGGCCT TCGCCGCGCC CGCGCTTGCG 
GCTGACATTG CGCCGCGGCC CTATACAAAG GCGCCGGTGC CCTATACGCC GCCGCAGGCT
GTTTACAACT GGACCGGCTT TTACATCGGT GGCCATCTCG GCGGCGCGTT CGGCGGCGAT
CTGGGTGGAA GCGACGGCCG TTTCCTCGGC GGTGTGCAGG GCGGCGCCGA CTACCAGTTC
GCGAACAACT GGGTGCTCGG CATCGAGGCC CAGCATAGCT GGCTCGCCAA CTACAGAGAG
AACGTGGCCT TTCCGGGCGG CAGCGTTGTG ACCGGCGGCA ACAGCGGGCT GGGTTCGGTG
ACCGGCCGGC TCGGCTATAG CTGGGGACCG ACCCTTCTCT ACGCCAAGGG CGGCTATGCG
TTCAGGGACG GCGCGCTCGG TGTGACCGAC GCGGCCGGCG CGCCGCAGGC TTTCACAACC
ACCGGAAATC GAAATAGCGG TTACACCGTC GGCGCGGGTC TCGAATACAT GTTCGCGCCG
AACTGGTCCG CCAAGGCGGA GTACCAGTAT TTCAATTTCG GCAGAACGAC ATTCGGCGCG
GGTTCGCCGG CGGATGTTGT CGGAGCGAGC TTCCGCAACG ACGAGCATAC CGTGAAAGCC
GGCGTGAACT ATCGCTTCGG CTGGGGTGGG CCACCGGCCC CTCAATATCC GGCTCCTCAA
TATTGA
 
Protein sequence
MKKFLLTAVV ATAFAAPALA ADIAPRPYTK APVPYTPPQA VYNWTGFYIG GHLGGAFGGD 
LGGSDGRFLG GVQGGADYQF ANNWVLGIEA QHSWLANYRE NVAFPGGSVV TGGNSGLGSV
TGRLGYSWGP TLLYAKGGYA FRDGALGVTD AAGAPQAFTT TGNRNSGYTV GAGLEYMFAP
NWSAKAEYQY FNFGRTTFGA GSPADVVGAS FRNDEHTVKA GVNYRFGWGG PPAPQYPAPQ
Y