Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1150 |
Symbol | |
ID | 3674746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 1260594 |
End bp | 1262873 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637712700 |
Product | penicillin-binding protein 1A |
Protein accession | YP_317764 |
Protein GI | 75675343 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGCAACA TCCTGCCCCC CGATTGGAAG AAGCGAATCC GGCATATCAT GCTGGATCTC GACGCGCGTA TCGATTCGAC CCTGTTCTCC TCGGCGGTCG GCGCGCGCGA GCTTTATGAG CGCTTCTCAA CTTTCATGGA CCGCTTTTAT GTCGGCCATT GGAAACGCTG GATCTTCGTC GAGCCCTTGT CGGAAGCCGC GACCCTGGGC CTCGGCGGTC TCATCCTCCT GCTGGCGCTG GCGCAGCCAG CGTTTCGCGA AACCGCCGAC GAGGACTGGC TGAAGAAATC CGATCTCGCG GTGACCTTCC TCGATCGCTA CGGCAATCCG ATCGGCAGCC GCGGCATCAA ACACAATGAT TCGATTCCGC TGGAGGAGTT TCCGGACAAC CTGATCAAGG CGACTCTCGC GACCGAAGAC CGCCGTTTCT ATAATCATTT CGGCATCGAC GTCGGCGGCA CCTTCCGCGC GGTGGTGACC AACGCGCAAG CCGGCGGCGT GCGGCAGGGC GGCTCCTCGA TCACCCAGCA ACTCGCCAAG AACCTTTTCC TCTCCAATGA GCGCACCATC GAGCGCAAGG TCAACGAAGC CTTCCTCGCC GTCTGGCTGG AAACCCGACT GAGCAAGAAC GAGATCCTGA AACTGTATCT CGACCGGGCG TACATGGGCG GCGGGACCTT CGGCGTCGAC GGCGCGGCGC ATTTCTATTT CAACAAGTCG GTGCGCGACG TCAATCTCGC CGAATCCGCC ATGCTCGCCG GCCTTTTCAA GGCGCCGACC AAATACGCCC CGCACATCAA CCTGCCTGCC GCTCGCGCCC GCGCCAACCA GGTGCTCGAC AACATGGTCG ATTCAGGCTT CATGACCGAA GGTCAGGTGT TCGGCGCGCG GCGCAACCCC GCCACCGCGG TCGACCGCCG CGACGAGAAC TCGCCGAATT ATTATCTCGA CTGGGCATTC GAGGAAATGC GCAGGCTGGT CGAGACCTTT CCGCGCTCCT ATACCGAGCG CGTATTTGTC GTGCGCACCA CGATCGACAT GAACGTGCAG CACGCGGCGG AAGAGGCGAT CGAGAGCCAG TTGCGGCAGT TCGGCCGCGA CTATCACGCC ACGCAAGCGG CAACGGTGGT CGCGGATCTC GACGGCGGCG TGCGCGCGAT GGTCGGCGGG CGTGATTACG GCGCGAGCCA GTTCAATCGC GCGACGGACG CCCTGCGCCA GCCCGGATCC TCGTTCAAGC CGTATGTCTA CACCACGGCG CTGCTCAACG GCTTCAAGCC GACATCCAAG ATCGTCGACG GTCCCGTCTG CCTCGGCAAC TGGTGCCCGC AGAATTATGG TCATTCCTAC TCCGGCACGG TGACGCTGAC CCAGGCGCTG ACGCGCTCAA TCAATGTCGT GCCGGTGAAG CTCTCAATCG CGCTCGGCAA GGGCGCGAAG AATCCCGCCA AGGCCGGACG CGCCAAGATC ATCGAGGTCG CCCGCAAGTT CGGCATCGTC ACGCCGCTGC CCGATACGCC GTCGCTGCCG ATCGGGGCCG ACGAGGTCAA TGTGCTCGAA CATGCCGTCG CCTATGCGAC GTTCCCGAAC AAGGGCAAGG CGGTGACGCC CCACGCGGTT CTCGAGGTCC GCACCGGCGC CGGCGATCTG GTGTGGCGCT ACGACCGCGA CGGTCCCGAA CCGCGCCAAA TCATTCCGCC TTCAGTCGCC GCGGACATGG CGGGCATGAT GAGTCATGTG GTGAGCGAAG GCACCGCGCG CCGCGCGATC CTTGACGGCA TTCCCGCCGC CGGCAAGACC GGCACCACCA ACGCTTATCG CGACGCGTGG TTCGTCGGCT ACACCGGAAA CTTTGCATGC GGTGTCTGGT ACGGCAATGA CGACTACTCA CCGACCAATC GCCTGACCGG CGGCGCGCTG CCCGCCCAAA CCTGGCACGA CATCATGACG GCCGCGCATC GCGGTATCGA GATCAAGGAC ATCCCCGGTG TTGCCACGCC GGCGAAACCG ACCGCAGCCA TGACCGCCAG AACCGCAGCC AGCCAGGACA ATGCAACCCC GGCCCCCCCG CCTATCCTGA CCAGGCGCGG AGCCGATATC CTGGTCCGCG TGGAAAAGAT GCTTGATGAA GCAGCCAGGA CAATCGGAAA AACCTCGGCT GGAGAACCGG TCAATCCGGC TCGCTCCGAC GCCACCGATC CGACCTCGCC CCGCGGTGAG GCCAAGAACG TGGCGACCGC GTCCGGCGAC CGGGCGATCC CGACGCCAAG CAAAAATTAG
|
Protein sequence | MRNILPPDWK KRIRHIMLDL DARIDSTLFS SAVGARELYE RFSTFMDRFY VGHWKRWIFV EPLSEAATLG LGGLILLLAL AQPAFRETAD EDWLKKSDLA VTFLDRYGNP IGSRGIKHND SIPLEEFPDN LIKATLATED RRFYNHFGID VGGTFRAVVT NAQAGGVRQG GSSITQQLAK NLFLSNERTI ERKVNEAFLA VWLETRLSKN EILKLYLDRA YMGGGTFGVD GAAHFYFNKS VRDVNLAESA MLAGLFKAPT KYAPHINLPA ARARANQVLD NMVDSGFMTE GQVFGARRNP ATAVDRRDEN SPNYYLDWAF EEMRRLVETF PRSYTERVFV VRTTIDMNVQ HAAEEAIESQ LRQFGRDYHA TQAATVVADL DGGVRAMVGG RDYGASQFNR ATDALRQPGS SFKPYVYTTA LLNGFKPTSK IVDGPVCLGN WCPQNYGHSY SGTVTLTQAL TRSINVVPVK LSIALGKGAK NPAKAGRAKI IEVARKFGIV TPLPDTPSLP IGADEVNVLE HAVAYATFPN KGKAVTPHAV LEVRTGAGDL VWRYDRDGPE PRQIIPPSVA ADMAGMMSHV VSEGTARRAI LDGIPAAGKT GTTNAYRDAW FVGYTGNFAC GVWYGNDDYS PTNRLTGGAL PAQTWHDIMT AAHRGIEIKD IPGVATPAKP TAAMTARTAA SQDNATPAPP PILTRRGADI LVRVEKMLDE AARTIGKTSA GEPVNPARSD ATDPTSPRGE AKNVATASGD RAIPTPSKN
|
| |