| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1117 |
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| Symbol | |
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| ID | 3677301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 1226303 |
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| End bp | 1228168 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637712667 |
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| Product | patatin |
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| Protein accession | YP_317731 |
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| Protein GI | 75675310 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
[COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.142446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAATCCG ATCCCGATCT TCAGCAACGC GACGCGCTGC TCCAGACCGT GCTTCGCGAC
TACTTCGCGT CCGACAACGC AGAGATCCTG CACACCATCC GTTCCGTGGC CGAGTATGTC
GATCTGGTCT CCGGCGCGAT CCTGCTGCGC CAGGGCGACA TCAGTAACGA CGTGTACTTC
ATCCTGTCGG GACGGCTTCA CGCGTTCTCG GAGACCGAAT CCGGCGCGCG AAAAATTCTC
GGAGAGATCG GGCGCGGCGA AACCATAGGC GAGCTTGCGC TGTTCACCGG CGAGCCGCGC
TCGGCGACCG TCGTGGCGGT GCGCGATACG CTTCTGGTCA AGGTGACCCG CGCGATGATC
GAGCGGACGA TCCTGCAGCA CCCGGAAATC GAGATGTCGA TGATGCGGGC CGTGATCCGG
CGTTTCCGTC AGCGCGAACG CGAGCGGCAG GCGCCTCTGG TGCCGGTCAA GATCTGCATA
CTGCCGATCA CTTCCGGGCC GGATGCAGCC GGTTTCGCGC GAAGCCTGCG CAACGCGCAA
GCCGCCGAGG CCGGGCCGGT GGCAGTCGTC ACCAAAGATG ACGTCGCCAG CCACTTCGGC
GCTCAGGATC AAGCGCCGGG AAAACGCAAC GACGCGCTCG CCGGCTATAT CGACGACATC
GAGGCTCGGA ACCGCGCGGT ATACCTTGCC GCCGACGGAG GCGACACCGC ATGGACCCGG
TTTTGCCTTC GTCATGCCGA CGAGGTGCTG CTGCTTGCCA ACGCCGGCCG CGATCCCGGC
CTCTCGGCTG TGGAGCGTGC GTGCCTTTCG CCGGCCGCTC CCATCTCGAT CGCGCGGCAG
ACGCTGGTCC TGCTGCACCG GGCTGATACG AGAATTCCCA CCAGCACCGC GCATTGGCTG
AACGCGCGAC CGGACGCGCG GCACTTCCAC ATTCGTCCGG AACTGCCCGC CGACATGCGC
CGCCTCGCTC GCATCGTATC AGGGCGGGCC ATCGGGCTCG TGCTGTCGGG CGGAGGCGCG
CGCGGCTTCG CTCATGTCGG CGTCATCAAG GCGCTGGAAG AGGCAGGCAT TCCCGTCGAC
ATGCTGGGCG GCAGCTCCAT CGGCGCGGTC ATGGGAATGG TGCTGGCGCT CGGGCGCAGC
GCGGAGGAAG TCACGGCCGC CGTCCGAAAG GCGTTCCTCG AACATCCGAG AGGCAACGTC
ACCGGCGACT ACAACTTCAT TCCGCTGGTG TCGCTGATCA AGGGTGCACG CACGCGAAGC
GCGATGACGC AGGCCGTGCG CGACGCCACC GGCCGGGACG CGATCGACAG CGAGGATTGC
TGGACCACCT TCTTCACCAT CGCATCAGAC TTTTCGACCG GCAGCGAAGC TGTCCTTCAG
CGAGGCGACC TTACCCGCAA CGTCGGCGCA AGCTATGCGA TTCCCGGCGC GCTGCCGCCG
GTCTTCGTCG GCGGACACAT GATGTACGAC GGCAGCACGT TCAACAATTT CCCGGTCGAC
GTGATGGCCC GGCTCGGCGC GGGCCGCATC ATCGGCGTCG ACCTCTCGGT TGACCGCGAG
CAGTTGTTCG ACATTGACGA TGTGCCGGGG ACGCTCACCT TGCTGCGCGA CAAACTAAGG
CCGCGCGCGA AGCGGCGCTA CCGTCTGCCG AGCGTGCCCG AGACGATGCT GCGATCGTCC
TTCATCACGT CGATCTCCAA ACAGAAGGAG ATGGGAAAGT TCACCGACCT GTTGTTCCGG
CCGCGGATCT CCGACGGTCG CCTGCTCGAC TGGAGTCGCT TCGAAGAGGT GGTGGCCGCC
GGCTACAGCC AGGCGAGGGA GATGCTGGCG GGCATGAGCG ACGAGCAGCG GAAGATGTTT
CGCTAG
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| Protein sequence | MKSDPDLQQR DALLQTVLRD YFASDNAEIL HTIRSVAEYV DLVSGAILLR QGDISNDVYF
ILSGRLHAFS ETESGARKIL GEIGRGETIG ELALFTGEPR SATVVAVRDT LLVKVTRAMI
ERTILQHPEI EMSMMRAVIR RFRQRERERQ APLVPVKICI LPITSGPDAA GFARSLRNAQ
AAEAGPVAVV TKDDVASHFG AQDQAPGKRN DALAGYIDDI EARNRAVYLA ADGGDTAWTR
FCLRHADEVL LLANAGRDPG LSAVERACLS PAAPISIARQ TLVLLHRADT RIPTSTAHWL
NARPDARHFH IRPELPADMR RLARIVSGRA IGLVLSGGGA RGFAHVGVIK ALEEAGIPVD
MLGGSSIGAV MGMVLALGRS AEEVTAAVRK AFLEHPRGNV TGDYNFIPLV SLIKGARTRS
AMTQAVRDAT GRDAIDSEDC WTTFFTIASD FSTGSEAVLQ RGDLTRNVGA SYAIPGALPP
VFVGGHMMYD GSTFNNFPVD VMARLGAGRI IGVDLSVDRE QLFDIDDVPG TLTLLRDKLR
PRAKRRYRLP SVPETMLRSS FITSISKQKE MGKFTDLLFR PRISDGRLLD WSRFEEVVAA
GYSQAREMLA GMSDEQRKMF R
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