| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1059 |
|---|
| Symbol | lpxC |
|---|
| ID | 3677018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | + |
|---|
| Start bp | 1156343 |
|---|
| End bp | 1157299 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637712609 |
|---|
| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
|---|
| Protein accession | YP_317673 |
|---|
| Protein GI | 75675252 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
|---|
| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.330575 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTCA ATCGCCAGAC GACGCTGCGT TCGCGAGCCA CCGTGACGGG TGTCGGCGTT
CATTCCGGAT TACCGGCCAA CCTGACTCTA GGGCCTGCGT CGATCGATGC GGGTTTTGTT
TTTATCCGCA CCTCTCCCGA TGGAACCGAA CGCCGGGTAC AGGCCGCCGC GAAATCCGTG
ACATCGACCA ATTTTGCCAC GGTCCTGGGC GATCAGCAAG GCTCTCTCGT CTCCACCGCC
GAACACGTTC TTGCTGCGTT GCGTGGCCTT GGCGTCGACA ACGCCACCAT CGAACTCGAC
GGACCTGAAG TGCCGATTAT GGATGGCAGT TCGGCTGCCT TCGTCGCCGC GATCGACCAG
GCCGGGATTG TCGAGCAGTC GGCGGCGCGC CGCTTCATCC AGGTTTTGAA ACCGGTCCGG
GTCACGAAGG GCGAGGCGGT CGGCGAATTG CGACCGTACA AGCGCGGCTT TCGCGTCGAG
GTCGAGATTG ATTTCGCCAA TCCGGTGATC GGCCATCAGG ACTATTCCAT CGATCTTGAT
CCCGAGAGCT TTCGTCGTGA AATCAGCCGG GCGAGAACCT TCGGTTGCAT GAACGATGTG
GCAAGGCTCC GAAGCGCGGG TTTCGCGCTG GGTGCGTCAT TGGAAAACTC GATGGTGTTC
GATGACGAGC GCCTGTTGAA TGCCGGTGGC CTGCGCTACG CCGACGAGTG CGTACGACAC
AAGGTTCTCG ATGCGATCGG CGATCTGGCG CTCGCCGGGT TGCCGCTGAT CGGCGGCTAT
CGCTCGGCGC GCGGCGGGCA CAAGCTCAAC CACGCGGTGC TGACGGCTTT GATGGCCGAC
CGGACCGCAT GGCGGGTAGT TGAGGATCAG CCGGTTTCGC GTCCGCGCAG TCAGGGCGAA
CTGGTCGGCG GAATGGTGGG CGGCATGGCT GCAGCCTATG GTCCCAACGT GTCCTGA
|
|---|
| Protein sequence | MRFNRQTTLR SRATVTGVGV HSGLPANLTL GPASIDAGFV FIRTSPDGTE RRVQAAAKSV
TSTNFATVLG DQQGSLVSTA EHVLAALRGL GVDNATIELD GPEVPIMDGS SAAFVAAIDQ
AGIVEQSAAR RFIQVLKPVR VTKGEAVGEL RPYKRGFRVE VEIDFANPVI GHQDYSIDLD
PESFRREISR ARTFGCMNDV ARLRSAGFAL GASLENSMVF DDERLLNAGG LRYADECVRH
KVLDAIGDLA LAGLPLIGGY RSARGGHKLN HAVLTALMAD RTAWRVVEDQ PVSRPRSQGE
LVGGMVGGMA AAYGPNVS
|
|---|
| |