| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1049 |
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| Symbol | murD |
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| ID | 3674872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 1143542 |
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| End bp | 1144942 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637712599 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_317663 |
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| Protein GI | 75675242 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0148666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCCG TCACATCCTT TTCCGGCAAG ACCGTCGCGG TATTTGGCCT CGGCGGTTCG
GGCCTTGCGA GTTGTCACGC CCTGAAGGCG GGCGGCGCCG AGGTGATTGC GGGCGACGAC
AACGCCGACA ATCTCGCGAA GGCGGCGCAG GCCGGTTTCA TCACCGCGGA TTTGCGAACC
GTGGTGTGGG CGAACCTCGC CGCGCTGGTG CTTGCGCCGG GCGTGCCGCT GACGCATCCC
TCGCCGCACT GGAGCGTGCT GGCGGCGCGG CAGGCGGGCG TCGAGGTGAT CGGCGACGTC
GAACTGTTCT GCCGCGAGCG CGCACGTCAT GCGCCCGACG CGCCTTTCAT CGCCATCACC
GGCACCAACG GCAAGTCCAC TACGACGGCG CTGGTCGCGC ATCTGATGCG CGAGGCCGGA
TACGACGTGC AGATGGGCGG CAACATCGGC ACCGCGATCC TGTCGCTGGA GCCGCCGCGC
AGAGGGCGCG TGCATGTGAT CGAGATGTCG TCGTACCAGA TCGACCTCGC GCCCTCGCTC
GATCCGACCG TCGGCATTCT GCTCAACCTC AGTCCCGATC ACCTCGATCG CCACGGCACC
ATCGAACATT ATGCGCAGGT GAAGGAGAGG CTCATCGCCG GGGTGCAGCC GCAGGGCACG
GCGGTCGTCG GCGTCGATGA TCACTGGTGC GCGGCGATCG CCGACCGTCA GGAGCAGGCC
GGACGCAGCG TCGTGCGCGT GTCGGTGAAG CGGCCACTGG CGCATGGCGT CAGCGTCGAA
CAGGACAGGA TCGTTCTCGT GTCCGGCGGC GCGCGCAGCG AAATCGCCGA CATCGGCGGA
ATAGGCTCGC TGCGCGGGCG GCACAACGCG CAGAATGCGG CCTGCGCTTC GGCGGGGGCG
CTGGCGCTCG GGGTCAGCCG GGACATCCTG CAGCAGGACT TGCGCAGTTT TCCCGGTCTC
GCGCATCGCA TGGAGCAGGT GGGGCGCAAG GCCCATGTGC TGTTCGTCAA CGACTCCAAG
GGCACCAACG CCGACGCCAC CGAGAAGGCG TTGTCGTCCT TCGACGAGAT TTTCTGGATC
GCGGGCGGCA AGCCGAAAAG CGGCGGTATC GCCTCGCTCG ACGCGTTCTT TCCGCGCATC
CGCAAAGCCT ATCTGATCGG AGAGGCGGCG CAGGAGTTCG CGGCGACGCT GGAGGGCAAG
GTGGCCTACG AGATCAGCGG AACGCTGGAA GCCGCGGTGC CCGCCGCCGC GCGGGACGCG
GAAGGAGCAG GCCGTGCCGG GGCGGTGGTG CTGTTGTCGC CGGCCTGCGC TTCATTCGAT
CAGTTTCGCA ATTTTGAAGT TCGCGGCGAT CGCTTTCGCG AACTGGTCCA GGCGTTGCCG
GGCGTTACGC CCGTCGTGTA G
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| Protein sequence | MIPVTSFSGK TVAVFGLGGS GLASCHALKA GGAEVIAGDD NADNLAKAAQ AGFITADLRT
VVWANLAALV LAPGVPLTHP SPHWSVLAAR QAGVEVIGDV ELFCRERARH APDAPFIAIT
GTNGKSTTTA LVAHLMREAG YDVQMGGNIG TAILSLEPPR RGRVHVIEMS SYQIDLAPSL
DPTVGILLNL SPDHLDRHGT IEHYAQVKER LIAGVQPQGT AVVGVDDHWC AAIADRQEQA
GRSVVRVSVK RPLAHGVSVE QDRIVLVSGG ARSEIADIGG IGSLRGRHNA QNAACASAGA
LALGVSRDIL QQDLRSFPGL AHRMEQVGRK AHVLFVNDSK GTNADATEKA LSSFDEIFWI
AGGKPKSGGI ASLDAFFPRI RKAYLIGEAA QEFAATLEGK VAYEISGTLE AAVPAAARDA
EGAGRAGAVV LLSPACASFD QFRNFEVRGD RFRELVQALP GVTPVV
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