Gene Nwi_1042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1042 
Symbol 
ID3674893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1134819 
End bp1135670 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content63% 
IMG OID637712592 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_317656 
Protein GI75675235 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCGT CTGTCAGTCC TGACATCAAA CGTCGACGCC CTCTCCCGGT CCCCAAGGCC 
ATTGTTGGAA TGCCGACTTT CGTCCCGGAC TCATCCCTCG TCTCCGACAC GGTGCCGTCC
TTGAATTTCG GCGACCGCGC CAAAGGTCGG CAGCCGGACA TGATCGTGCT GCATTATACC
GGGATGCCCG ACGTCGAGGG CGCGCTGGCG CGGCTGTGTA CGTCCGGCAC CGAGGTGTCG
GCACATTACG TGGTGCTTGA GGACGGTCGC GTTGTGCAAT GCGTTCAGGA GTCAAAGCGG
GCCTGGCACG CCGGCGTCGC TTCATGGGCG GGCGAGGAAG ACATCAATTC CTGCTCGATC
GGAATCGAAA TCGTCAACCG TGGCCACGAC TGGGGCTACC CGGCTTTCCC GCTACGACAG
GTCGCCGCCG TTATCGCGCT ATGTCGCGGC ATCATTCATC GACGGGATAT TCCGGCTCAT
CGCATTGTCG GCCATTCCGA CGTTGCGCCT GCGCGCAAGA AAGACCCCGG CGAAAAATTC
CCGTGGCATT CGCTGGCGGA TTCAGGCGTC GGCCACTGGA TCCGGCCCGC GCCCATCGTG
GCGGGCGAGG TGCTGAAAAC CGGCAGCGAA GGCGACGACG TCCGTGCGCT GCAGCAATCG
CTGGCGCGGT ACGGCTACGG CATCAAGGCA ACCGGCAAGT TCGATACCGC GACGATGGAA
GTGGTCACAG CCTTTCAGCG TCACTTCCGG CCCGCGAAGG TCGACGGGAT CGCCGATCAA
TCGACATTGA CCACGCTGCA CGCGTTGCTC GACAGCCTGC CCGCGCAAAA AGCATCGAAC
GGAATTCGCT GA
 
Protein sequence
MFASVSPDIK RRRPLPVPKA IVGMPTFVPD SSLVSDTVPS LNFGDRAKGR QPDMIVLHYT 
GMPDVEGALA RLCTSGTEVS AHYVVLEDGR VVQCVQESKR AWHAGVASWA GEEDINSCSI
GIEIVNRGHD WGYPAFPLRQ VAAVIALCRG IIHRRDIPAH RIVGHSDVAP ARKKDPGEKF
PWHSLADSGV GHWIRPAPIV AGEVLKTGSE GDDVRALQQS LARYGYGIKA TGKFDTATME
VVTAFQRHFR PAKVDGIADQ STLTTLHALL DSLPAQKASN GIR