Gene Nwi_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1018 
Symbol 
ID3676687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1115493 
End bp1116473 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content62% 
IMG OID637712568 
Producthelix-turn-helix, Fis-type 
Protein accessionYP_317632 
Protein GI75675211 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.759642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTATC CTGCATCCGA AAAGGCCGAG ATCATTCGCC TGGTCGAGGC CTCGCATCTG 
CCGGCACGGC GAACCCTGGA CAAGCTCGGC ATCCCGCGCG CCACGTTCTA TCGCTGGTAC
GATCGCTATC TCACCGGTGG GATCGAGGCT CTGGCCGATC ATCGCTCGCG GCCGGATCGT
GTCTGGAACC GGATTCCTGA CCCAATCCGG GCCGAGATCG TCGAGCTGGC GCTGCGCGAA
ACGGAGCTGA GCCCGCGCGA GCTGGCGGTG CGCTTCACCG ACGAGAAGCG CTACTTTGTC
TCGGAGGCGT CGGTATATCG GCTGCTGAAG GCTCATGATC TCATCACCAG CCCAGCCTAT
ATCGTCATCA AGGCGGCGTC TGAGTTCAAG GACAAGACGA CAGCGCCCAA CCAGCTCTGG
CAAACCGACT TCACCTACCT GAAGATCACG GGTTGGGGCT GGTATTATCT CTCGACCGTG
CTCGACGACT TCTCCCGCTT CATCGTCGCC TGGAAGCTCT GCGCCACGAT GCGGGCGGAT
GACGTCACCG CCACGCTCGA TCTGGCTCTG GCGGCATCGG GGCTCGACCA GATCACGGTC
GCGCATCGGC CGAGGCTGTT GAGCGACAAC GGCGCCTCAT ACATCTCGGC CGAACTCGCT
ACCTGGCTCG ACGGCAAGGG CATGAAACAC GTTCGCGGCG CGCCGTATCA TCCCCAGACG
CAGGGCAAGA TCGAGCGCTG GCATCAGACC CTGAAGAACC GCATCCTGCT GGAAAACTAC
TATCTGCCCG GCGACCTTGA ACGGCAGGTC GCGGCCTTCG TCGAGCACTA CAATCACGGC
CGCTATCACG AGAGCATCGA TAATCTCACG CCCGCTGACG TCTACTTCGG CCGCGGGCAG
ACCATCCTCA CCGAACGCGA AAGGATCAAA CGCCAGACCA TCCACCAAAG ACGCTTGCAG
CATCACCTGC AGGCCGCCTA A
 
Protein sequence
MRYPASEKAE IIRLVEASHL PARRTLDKLG IPRATFYRWY DRYLTGGIEA LADHRSRPDR 
VWNRIPDPIR AEIVELALRE TELSPRELAV RFTDEKRYFV SEASVYRLLK AHDLITSPAY
IVIKAASEFK DKTTAPNQLW QTDFTYLKIT GWGWYYLSTV LDDFSRFIVA WKLCATMRAD
DVTATLDLAL AASGLDQITV AHRPRLLSDN GASYISAELA TWLDGKGMKH VRGAPYHPQT
QGKIERWHQT LKNRILLENY YLPGDLERQV AAFVEHYNHG RYHESIDNLT PADVYFGRGQ
TILTERERIK RQTIHQRRLQ HHLQAA