Gene Nwi_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1005 
Symbol 
ID3676215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1099662 
End bp1100768 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content67% 
IMG OID637712554 
ProductFAD dependent oxidoreductase 
Protein accessionYP_317619 
Protein GI75675198 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.179288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGGA TCGAGTGCGT TGTCGTGGGC GCTGGCGTGA TCGGGCTCGC GGTCGCGCGG 
CGGCTCGCAC GCGCCGGCCG GGAAGTGATC GTTCTCGAGG CTGCGGAGAA CATCGGAACG
GGAACATCGT CGCGCAACAG CGAGGTGATA CACGCCGGCA TCTACTATCC CTCCGGCAGC
CTGATGGCGC GAACCTGCGT CAGCGGTCGC CCGGCCCTCT ACGCTTACTG CCGGGAGCAC
AGCATTCCAC ACAGCATGTG CGGCAAGCTG ATCGTCGCGG CCACCGAAGG CGAGGTCGAC
AGGCTGCAAA TCATCAGAGC CCAAGCGGAG GCCAATGGCG TTGAAGACAT CCGGTTCCTG
AACGGCGACG AGGCCCGCGC GCTTGAGCCG GCGCTGCGCT GCGTGGCCGG GCTGCTGTCT
CCCTCGACCG GCATCATCGA CAGTCACGCC TTCATGCTGG CCTTGCGCGG TGACGCCGAG
CGGGACGGCG CGGCGTTCGC ATTTCATACT CCCCTGTCGG GCGCCAGGGC GACGCCTCAT
GGGCTTGAGA TCAAAACCGG CGGCGACGCG CCGATGACGC TCGTCTGTGA CCTGCTGGTC
AATGCCGCCG GCCTTGATGC TCCGGCAGTG GCGCGCCGCA TCGACGGCAT GCCCGTGGAA
CGGATTCCAC CGGCCTACCT CGCCAAGGGA AGCTATTTTA GTTGCAGCGT CCGTGCGCCG
TTTTCGCGCC TGATCTATCC TGTCCCCGAG CCCGGCGGCC TTGGCGTGCA TCTCACGCTC
GACCTCGCGG GCCAGCCTCG GTTCGGCCCC GACGTGGAAT GGATCGAAAC ACCGAACTAT
GACGTCGATC CGGCGCGCGC GACCCGGTTC TACCCCGCGA TCCGGCGCTA CTGGCCTGAC
CTGCCTGACG ACACCCTGAT TCCCGCCTAT TCCGGCATTC GGCCCAAAAT CGTGCCGCCG
GCGGTGGCGG CGCAGGACTT CATGATCCAG GGGCCCGCGG ACCACGGCCT GTCCGGGCTG
ATCAACCTGT TCGGAATTGA GTCGCCCGGC CTGACCGCAT CACTTGCGAT CGCCGATCAC
GTCGCCGCCC TCGCCGCTCA ACGGTGA
 
Protein sequence
MDRIECVVVG AGVIGLAVAR RLARAGREVI VLEAAENIGT GTSSRNSEVI HAGIYYPSGS 
LMARTCVSGR PALYAYCREH SIPHSMCGKL IVAATEGEVD RLQIIRAQAE ANGVEDIRFL
NGDEARALEP ALRCVAGLLS PSTGIIDSHA FMLALRGDAE RDGAAFAFHT PLSGARATPH
GLEIKTGGDA PMTLVCDLLV NAAGLDAPAV ARRIDGMPVE RIPPAYLAKG SYFSCSVRAP
FSRLIYPVPE PGGLGVHLTL DLAGQPRFGP DVEWIETPNY DVDPARATRF YPAIRRYWPD
LPDDTLIPAY SGIRPKIVPP AVAAQDFMIQ GPADHGLSGL INLFGIESPG LTASLAIADH
VAALAAQR