| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0963 |
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| Symbol | |
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| ID | 3674980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 1058387 |
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| End bp | 1059730 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637712512 |
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| Product | type I secretion membrane fusion protein, HlyD |
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| Protein accession | YP_317577 |
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| Protein GI | 75675156 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGA CAGCGACCGG CGATCAGCCC TGGCACGTCG ACCTTCCACG CTCGACACGA
GGCCTCACCC TTGCAGGCGT GGTGATCGTC GCTGTGACGG TGCTGGGATT CGGTGTCTGG
GGCAACACAG CGCCGATTGC CGGCGCCGTC GTGGCGTCCG GCGTGTTCGT GGCCACAGGC
CAGAACAAGA TCATTCAGCA TCTTGAAGGC GGCATGATCG ACGAGATCAA GGTTCGCGAA
GGTGACACCG TGGAACCCGG ACAGATCCTC GTTGAACTGG ACCGGACTTC GGCGAAAGCC
GAAATGCAGC GGCTCTTCCT TCGCAACGCG CGGCTCACGG CCCTCGATGC GCGCTTGCAG
GCACAGGTTC GCGAGGAAAC GGAAGTCCAC TTTCCGCCGG AACTGGCATC CGATTCAAAG
GATCCGCAGA TACGCAGCAT CGTCAACGCT CAACTGCTTT CTTTTACGGC CCAACGCAAC
AATGCCAACA GCGATATTGC CGGGATTGAG GATAGCATCA AGGCCCTGAA CGAGCGCATC
GCGGGTTCCA AGGTTCAACT CGACGGCGTG CGGCGACAGA TCGCGCTGAT CGAAGAAGAT
ATCAAGACCA AGGAGCACCT TTTGGCGGCG GGGCTCGTGC GCAAGCCCGA GGTTCTTCTT
CTGCAACGCA ATCAGGCCAA TCTGGAAGGC GAGGTCGGCC GCATCATGGG CGACATCGGT
GACGCCAAGG AGCGGATATC CCGCGCGGTC GAGCAGATCA ACGGCGTGCG GAAGGTCGCC
ATCAAGACCG CCGTCGAACA GATGCACGAA GTGCGTGGTG AACTGGCCGA TGTCCGCGAG
CGGATGCAGA GCGCAAAGGG CGTCCTTGAC CGGACCACGA TCCGCGCGCC GGTCAAGGGC
GTCGTCGTCA AGCTGCGATT TCATACGCGC GGCGGCGTGG TGGAGCCGGG AAAGCCCATC
ATGGAGTTGC TGCCGCTTGA TGAGCCGTTG ATCATCGAAG CCAGGGTGAG GCCCCAGGAT
ATCGACTCGG TCAAGCACGG CCAGGAAGCG ATGGTTCGGC TGACGGCGCT CAGCCAGCGG
ATTACGCCGA TGGTTTCCGG AGACGTTATC TATCTCTCGG CCGATACGGT CGCCGACGAA
AAGAAGTCGC AACAGACCGG ACCGAGCGAC ATCTATGTCA TTCGCGTGCG GCTGAACAAC
GCCGAAGTTG TCGCGATCCA CGGCTTCCAT CCGACGCCGG GCATGCCGGC TGAAGTCTTC
ATCAAGACCA GCGAACGAAC CTTCTTCCAG TACATCATGA AGCCGATCGA TGACAGCATG
TCACGGGCGT TTCGCGAGCG ATAG
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| Protein sequence | MSMTATGDQP WHVDLPRSTR GLTLAGVVIV AVTVLGFGVW GNTAPIAGAV VASGVFVATG
QNKIIQHLEG GMIDEIKVRE GDTVEPGQIL VELDRTSAKA EMQRLFLRNA RLTALDARLQ
AQVREETEVH FPPELASDSK DPQIRSIVNA QLLSFTAQRN NANSDIAGIE DSIKALNERI
AGSKVQLDGV RRQIALIEED IKTKEHLLAA GLVRKPEVLL LQRNQANLEG EVGRIMGDIG
DAKERISRAV EQINGVRKVA IKTAVEQMHE VRGELADVRE RMQSAKGVLD RTTIRAPVKG
VVVKLRFHTR GGVVEPGKPI MELLPLDEPL IIEARVRPQD IDSVKHGQEA MVRLTALSQR
ITPMVSGDVI YLSADTVADE KKSQQTGPSD IYVIRVRLNN AEVVAIHGFH PTPGMPAEVF
IKTSERTFFQ YIMKPIDDSM SRAFRER
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