Gene Nwi_0924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0924 
Symbol 
ID3674386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1011346 
End bp1012488 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content65% 
IMG OID637712473 
ProductOrn/DAP/Arg decarboxylase 2 
Protein accessionYP_317538 
Protein GI75675117 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.215223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC GCATTCGGGA ATTCCTGCGC GACCGCCGCA ACAAAGGCAA CGACACCGAG 
CCCTGCCTCG TGGTCGATCT CGACATCGTG CGCGACAACT ATCAGGCCTT CGCGAAGGCG
TTGCCGGACT CGCGCGTGTT CTACGCCGTG AAGGCGAACC CCGCGCCCGA GGTGCTGAGC
CTGCTTGCCT CGCTCGGTTC GTGCTTCGAC ACCGCGACCG TCGCCGAGAT TGAAATGGCG
CTTGCCGCCG GCGCGACGCC GGACCGCATC TCCTTCGGCA ACACCATCAA GAAGGAGCGC
GATATCGCGC GCGCCTACGC GCTCGGCATT CGCCTGTTCG CCGTGGACTG CCATGCGGAA
GTCGAGAAGA TCGCCCGCGC CGCGCCGGGA GCGAAGGTGT TCTGCCGCAT CCTCTACGAC
TGCGCGGGCG CCGAGTGGCC GCTGTCGCGC AAGTTCGGCT GCGACCCGGA AATGGCGGTC
GAGGTGCTCG ACCTCGCCAA GCGCCTCAGC CTCGAGCCGA TCGGCATTTC GTTCCATGTC
GGTTCGCAGC AGCGCAAGGT GAAAGCCTGG GATCGTGCCC TGGCGATGGT CTCGCAAGTG
TTCCGCGACT GCGCCGAACG TGGAATCAAC CTGACCATGG TCAACATGGG CGGGGGTTTT
CCGACGAGGT ACCTGAAGGA CGTTCCGCCG GTCGTGCAGT ACGGCCGGTC GATCTTCCGC
GCGCTGCGCA AGCACTTCGG CAATCAGATC CCGGAGACCA TCATCGAGCC GGGCCGCGGC
ATGGTCGGCA ACGCCGGCGT GATCGAGGCG GAAGTCGTTC TGATCTCCAG GAAGAGCGAC
AACGAAGAGA GCCGCTGGGT CTATCTCGAC ATCGGCAAGT TCGGCGGCCT CGCGGAGACC
ATGGACGAGT CCATCCGCTA CGCGATCAGG ACGCCACACG ACGGCGCCGA GATGACGCCC
TGCGTGCTGG CCGGCCCGAC CTGCGACTCG GCCGACGTGC TCTACGAGAA GCAGCCGTAT
CCGCTGCCGG TCACGCTCGA GATCGGCGAC AAGCTGCTGA TCGAGGGCAC CGGCGCTTAT
ACGTCAACCT ACTCGTCGGT GGCCTTCAAC GGCTTTCCGC CGTTGAGGAC GTATCACATC
TGA
 
Protein sequence
MTERIREFLR DRRNKGNDTE PCLVVDLDIV RDNYQAFAKA LPDSRVFYAV KANPAPEVLS 
LLASLGSCFD TATVAEIEMA LAAGATPDRI SFGNTIKKER DIARAYALGI RLFAVDCHAE
VEKIARAAPG AKVFCRILYD CAGAEWPLSR KFGCDPEMAV EVLDLAKRLS LEPIGISFHV
GSQQRKVKAW DRALAMVSQV FRDCAERGIN LTMVNMGGGF PTRYLKDVPP VVQYGRSIFR
ALRKHFGNQI PETIIEPGRG MVGNAGVIEA EVVLISRKSD NEESRWVYLD IGKFGGLAET
MDESIRYAIR TPHDGAEMTP CVLAGPTCDS ADVLYEKQPY PLPVTLEIGD KLLIEGTGAY
TSTYSSVAFN GFPPLRTYHI