| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0907 |
|---|
| Symbol | |
|---|
| ID | 3674351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 987283 |
|---|
| End bp | 989904 |
|---|
| Gene Length | 2622 bp |
|---|
| Protein Length | 873 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637712456 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_317521 |
|---|
| Protein GI | 75675100 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0419] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00680218 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCT CGGCGCTGCG CCTGTTCAAC GTGAAGCGCT TCGCCGGCCG CGGTGTCGCC
ATCGAGGGGA TCGACGACGG CGTCAATGTG CTCTGCGCCG CCAACGAATT CGGCAAGTCG
ACGAGTTTCG AGGCGCTGCA TGCACTGTTC TTCCAGCCGC ATTCGAGCGC TTCCGGCGAT
GTCAGGACCC TCAGGCCCTA TAGCGGCGGC AGTCCGCTGG TCCAGGCCGA TATCGCGACC
GGCGAAGGCC GTTTCCGCAT TACGAAGCAG TATTTCGTCG GCCGGTCCGC GCGGGTGACC
GATCTCGCCA CGGGGCAACT GGTGGCGCAG GCGGACGAAG CGGAGAATTT CATCGCCAAC
CTGGTCAAGG GAGGCACCGC CGGTCCGGCG GGGCTTCTCT GGGTGCGCCA GGGGGTGACC
GCGATCGAAA GACGCAGCAA ATCCGACGAC GGAGAACGCG AAGTTCGCCG CTCCCTGCTC
GAATCCGTGC AAGGCGAGGT CGAGGAAGTC ACCGGCGGGC GGCGCATGAC CGAGATCCTT
TCCGCCACGC AACAGGCTCT TTCGGAACTG GTCACCGCCA CCGGCAGGCC CAAGGCCGGC
GGGCGATACG CATCCGCCCT TGACGAGCGT GACAAACTGA TCGCAGACGA AAAAGAGCTT
TCGGACGAAG TCGCGGCCCT GCGCGAGGCG CTGGATCAAC GCGCCTCGGC CACAAAGAGC
CTTGCCGAAC TCGACAGGGC CGACGACAGG CAGCAACGAC GCAAGGCCGT GGAGGCGGCG
CAAGCCGCCT TCGACGCCGC CAAGTCCCAA CGCGAGAAGC TGAGGACGGC CGAAGCCGAA
CTCAGGCTTG CGCTCGAGCG CCGGGGCGTT GCAGAGAAAG AGCTTCTGGC CTTCCGCACC
GCTATGGAAA CAGCAAGGGA GTTGCGTCAA GAGCGGCTTG CGGCTGAAGA TCGACGCCGC
CGGGCCGTGG AAAACCGTCG TGAGGCCCGC GAGGCGATCG CAAAGGCAAC GGCAGAGTCT
GAGGCGGCGG AGGCTGGCGA GAGGGAGACG CGCGACCTGC TCGCGCGCCT GGACGCGGCG
TTGAGAGCGC GCGAAGCATT CGAGCGCCTC GCCCAACTCA AGGATCAACT CGCCAGCGCG
GAAGCAACCC GTGAAGAGCT GGAACGCGGC GAAGCAGAAC TTTCGCTTCT CAAACTGCCA
TCGAACGCCG TGGACGAGCT TCAGGATCTC GAAATCGAGA TCGCAAAGCT TCACGCCGTC
GAGGAAGCCG CACGTCCTTC CGTTGCCGTC GACTATCAGC CGGATGCGAT CGGTCTCGTG
ACGATGAATG GCGATCCGCT GTCGGACAGG CAGGAGCGCA CCTATGACGG ACAGGCGCGG
CTTACGATTC CAGGAATCGG CACGGTAACG CTGCGATCGA ACCGGCCGTC CTTGAGCGAT
GGTCGCCTTG AACGAGCCCA GGCAGAGCGG CGCACGCTCC TATCTTCAAT GGGTGTTGAC
GACCTTGCCG CCGCACGGAA GCGGCAAGTC GAGGCCCAAA AGATGGACGC AGAGCTGCGC
GAATTGCGAG GCCGGCTATC CCAGCTTGCG CCGGATGGCT TGACAAGGCT GCGGGAGGAC
GTCGCCGCAC AAAGCGCGGT CGATTCCGGG GATCTCGAAC TGAAAGCGGA CCCGGCGCAG
GTTCGGGCGA CTCTGGCCGA AGCCGGGGAA CGGCTGAAGG CCGCCCGGCT GGCCCTGCGA
GAGACCGAGC CGCTGCGCGG CAGAGCCGAG GAAGCCTTTG TCGCAGCCGA AACGAAGCTG
GCGAAGCTGA ATGCCGAGCA GGCGCAGATC GATTCAATCC TCGGCCCTGA AGAGGAGCGC
GCCGCACGCG AACAGCAGTT GGTGAAGGTC CGCGATGATC GGGAACGATC ACGCGCCGAA
GCCGAAACGG ATGCGAAGAA GCTCAGCGAC ACCGCCACCG ATCTCGAGTC CGCCGAGGCT
GCGCTGAAGC GCGCGCGCTC GGTTGAAGAA GCCTCCGAGA AAGAGATACA CCGTCTCCGG
GAGACCATTG CCGGCTTGAA CGCCGGGATA CGGGCGCGCG CCGACGAGGC GGTGGAAGAG
AGATGGCGCG AGAGCGCGGA CGCGCGTTCC GCCGCAACGG TCCGCGTCGC AGCGTTCGAG
AAGGAAATCG CCATCCTGCA ACGGCTGGCG TCAGCTTTGG AGAAAGCCAG GACCGAAGCA
CGTGAACTCT ATCTCAAGCC TGTCATGACT GAGCTCAAGC CGCTTCTCGG GCTGCTCTTC
GACGATGTTT CGATTACCTT CGATGACAAG TCGCTGCTGC CCCAGGCCAT CCGGCGCAAC
GGCCAGGAGG AGGAAGTCGA TCGCCTCAGC GGCGGCATGC GGGAACAGCT ATCGGTGCTG
ACACGTCTCG CCTTCGCAAG GCTGCTCGCC CGCGACGGCC GGCCCGCGCC GGTCATCCTC
GACGACGCCC TCGTCTATTC GGACGACGAC AGGATCGAGA AGATGTTCGA CGCGTTGCAC
CGGCAATCGA GGGAGCAACA GATCATTGTG TTCTCCTGCC GCCAGCGCGC ATTCCAGAAG
CTCGGCGGGA ACATCCTTCA GATGACCGAG TGGCAACCCT GA
|
|---|
| Protein sequence | MKISALRLFN VKRFAGRGVA IEGIDDGVNV LCAANEFGKS TSFEALHALF FQPHSSASGD
VRTLRPYSGG SPLVQADIAT GEGRFRITKQ YFVGRSARVT DLATGQLVAQ ADEAENFIAN
LVKGGTAGPA GLLWVRQGVT AIERRSKSDD GEREVRRSLL ESVQGEVEEV TGGRRMTEIL
SATQQALSEL VTATGRPKAG GRYASALDER DKLIADEKEL SDEVAALREA LDQRASATKS
LAELDRADDR QQRRKAVEAA QAAFDAAKSQ REKLRTAEAE LRLALERRGV AEKELLAFRT
AMETARELRQ ERLAAEDRRR RAVENRREAR EAIAKATAES EAAEAGERET RDLLARLDAA
LRAREAFERL AQLKDQLASA EATREELERG EAELSLLKLP SNAVDELQDL EIEIAKLHAV
EEAARPSVAV DYQPDAIGLV TMNGDPLSDR QERTYDGQAR LTIPGIGTVT LRSNRPSLSD
GRLERAQAER RTLLSSMGVD DLAAARKRQV EAQKMDAELR ELRGRLSQLA PDGLTRLRED
VAAQSAVDSG DLELKADPAQ VRATLAEAGE RLKAARLALR ETEPLRGRAE EAFVAAETKL
AKLNAEQAQI DSILGPEEER AAREQQLVKV RDDRERSRAE AETDAKKLSD TATDLESAEA
ALKRARSVEE ASEKEIHRLR ETIAGLNAGI RARADEAVEE RWRESADARS AATVRVAAFE
KEIAILQRLA SALEKARTEA RELYLKPVMT ELKPLLGLLF DDVSITFDDK SLLPQAIRRN
GQEEEVDRLS GGMREQLSVL TRLAFARLLA RDGRPAPVIL DDALVYSDDD RIEKMFDALH
RQSREQQIIV FSCRQRAFQK LGGNILQMTE WQP
|
|---|
| |