Gene Nwi_0854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0854 
Symbol 
ID3676295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp929793 
End bp930581 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content64% 
IMG OID637712405 
Producthypothetical protein 
Protein accessionYP_317470 
Protein GI75675049 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3843] Type IV secretory pathway, VirD2 components (relaxase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0909898 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTGTGG CCGGACGCCG GATGGCGTCT TTGGACCACG CCGGAATGCC TGTGATGATG 
CCCCGTGAAT CCGATGGAGA GATGCGCCGC GACGGTTCGA GCGCTGCCGA TGTGCAGCCG
AAACACCCCG TCGCCAAGAT GTTCGGTCCG CAGACCGACG ACGCTGACGT GAAGGATTTC
ACGGAGCGCT GCAAGGACGA CCGGCATCAC TTCAGGTTCA TCGTGTCCCC CGAGGACGCG
AGCGACATGG AGGATCTGAA GCGGTTCACC CGCGAACTGA TGACGCAGGC GGAAAAGGAC
CTCGGCACGA AACTCGAATG GGTCGCCGTC GATCACTGGA ATACCGACAA CCCCCATGTC
CACGTCATCG TGCGTGGTCG CGCCGATGAT GGCCGCGACC TTGTGATCGA CCGCGACTAT
ATCAAGAGCG GCATGCGTGA CCGTGCGCAG GACCTCATTA CGCAGGAACT TAGCCCGCGC
ACCGATCTCG ACATCAGCCG CGCACTGAGC CGTCAGATCG AAGCCGAACG CTGGACCCAG
CTCGACCGCC AGCTTGTCCG TGACGCCAAC GAGGAGGGCG TGATCGACGT GGCGCCGTCA
CCGGATCGCC AGCCCGACGC ATACCTGACG CAGAAGGTCG GGCGATTGCG CCACCTCGAA
CACCTCGGCC TTGCCGAGGC CATCGGCCCC GGCCAATGGG TCATGGCGGA AGGTGCGGAG
TCGACCTTGC GCGAACTCGG CCAGCGCAAC GACATCATCA AGCGGATGCA CCGCGCCCTC
GACGAGTAG
 
Protein sequence
MPVAGRRMAS LDHAGMPVMM PRESDGEMRR DGSSAADVQP KHPVAKMFGP QTDDADVKDF 
TERCKDDRHH FRFIVSPEDA SDMEDLKRFT RELMTQAEKD LGTKLEWVAV DHWNTDNPHV
HVIVRGRADD GRDLVIDRDY IKSGMRDRAQ DLITQELSPR TDLDISRALS RQIEAERWTQ
LDRQLVRDAN EEGVIDVAPS PDRQPDAYLT QKVGRLRHLE HLGLAEAIGP GQWVMAEGAE
STLRELGQRN DIIKRMHRAL DE