Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0854 |
Symbol | |
ID | 3676295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 929793 |
End bp | 930581 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637712405 |
Product | hypothetical protein |
Protein accession | YP_317470 |
Protein GI | 75675049 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0909898 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCTGTGG CCGGACGCCG GATGGCGTCT TTGGACCACG CCGGAATGCC TGTGATGATG CCCCGTGAAT CCGATGGAGA GATGCGCCGC GACGGTTCGA GCGCTGCCGA TGTGCAGCCG AAACACCCCG TCGCCAAGAT GTTCGGTCCG CAGACCGACG ACGCTGACGT GAAGGATTTC ACGGAGCGCT GCAAGGACGA CCGGCATCAC TTCAGGTTCA TCGTGTCCCC CGAGGACGCG AGCGACATGG AGGATCTGAA GCGGTTCACC CGCGAACTGA TGACGCAGGC GGAAAAGGAC CTCGGCACGA AACTCGAATG GGTCGCCGTC GATCACTGGA ATACCGACAA CCCCCATGTC CACGTCATCG TGCGTGGTCG CGCCGATGAT GGCCGCGACC TTGTGATCGA CCGCGACTAT ATCAAGAGCG GCATGCGTGA CCGTGCGCAG GACCTCATTA CGCAGGAACT TAGCCCGCGC ACCGATCTCG ACATCAGCCG CGCACTGAGC CGTCAGATCG AAGCCGAACG CTGGACCCAG CTCGACCGCC AGCTTGTCCG TGACGCCAAC GAGGAGGGCG TGATCGACGT GGCGCCGTCA CCGGATCGCC AGCCCGACGC ATACCTGACG CAGAAGGTCG GGCGATTGCG CCACCTCGAA CACCTCGGCC TTGCCGAGGC CATCGGCCCC GGCCAATGGG TCATGGCGGA AGGTGCGGAG TCGACCTTGC GCGAACTCGG CCAGCGCAAC GACATCATCA AGCGGATGCA CCGCGCCCTC GACGAGTAG
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Protein sequence | MPVAGRRMAS LDHAGMPVMM PRESDGEMRR DGSSAADVQP KHPVAKMFGP QTDDADVKDF TERCKDDRHH FRFIVSPEDA SDMEDLKRFT RELMTQAEKD LGTKLEWVAV DHWNTDNPHV HVIVRGRADD GRDLVIDRDY IKSGMRDRAQ DLITQELSPR TDLDISRALS RQIEAERWTQ LDRQLVRDAN EEGVIDVAPS PDRQPDAYLT QKVGRLRHLE HLGLAEAIGP GQWVMAEGAE STLRELGQRN DIIKRMHRAL DE
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