Gene Nwi_0703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0703 
Symbol 
ID3674949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp785786 
End bp786988 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content69% 
IMG OID637712254 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_317321 
Protein GI75674900 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02797] tonB-system energizer ExbB 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.515787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGCGC TGGCAAGCCA ACAGATATCC GGAACAAAGA GCATGATTGT GAGACTTGCG 
AAGGCGACGA TCCATCTGAC GTTTGCAGCG TTATTGGCTG TCCTCGTTCC ATCGGCTACG
GTTTTTGCCC AGCACCGGGC GTCGTCCCCG TCGACGACAT CGTCCGGGGG GGGGGCGGCG
GCAACTCCTT CTGCTTCTTC GGTGAACGGC TCTGCGGGGG CGGCTTCGGC TGCGTCTGCA
TCGCCGGGGC CGGCGAGTTC TGCTCCGTCG GCCACTGACG GGTCGGCTGG GGCTGCGTCA
TCGCAGCCGT CGGCGTCGAC GTCTCCCGAG GGGGCGTCTG ATGCGTCGTC CGGGGAGGGG
TCTGCTTCAT CTGATGCGTC TGCGGGTGCA TCGTCGGACG CGGCCGCGCC GTCGGATCAA
TCCGCCGCGC CGGATTCCGC CGCGCCGTCG CCTGCGCCGG AGGGCTCGTC GTCGACGCTT
CCGCAGGACC TGTCGCCGTG GGGCATGTTC ATGCAGGCGG ACATCGTCGT GAAAGCGGTA
ATGATCGGTT TGGCGTTCGC ATCATTGGTA ACGTGGACGG TCTGGCTGGC CAAGGGGATC
GAGCTCGCGG CGTCGCGGCG GCGGGCGCAG AGCTGCGTGC GCAAGCTGGA GCGCGCCGAC
AGCCTCGATG CCGCGCGCTC CGAGATCGCC GAGGGCTGGA CCTGTGAGGG CACAGTGGCG
GATCTGATGG GGGCGGCGGA GCGCGAGCTG CAGCGCTCGG GCGATCTGTC GTCCGAGGGC
ATCAAGGAGC GGCTGGCGAT CGCGCTGTCG CGCATCGAGG CCAAGGCGGG GCGCGACATC
GCCCGCGGCA CCGGCCTGCT GGCGACCATC GGGGCGACCG CGCCGTTCGT CGGCCTGTTC
GGCACGGTGT GGGGCATCAT GAACGCCTTC ATCGGCATCT CGCAGACCAA GACCACCAAC
CTCGCGGTGG TGGCGCCGGG CATTGCCGAG GCGCTGCTTG CGACCGCGCT CGGGCTTGTC
GCCGCGATCC CGGCGGTGAT CATCTACAAC GTGTTCGCTC GCGCGCTTTC GAGCTACCGG
GCGCTGCTGT CGGACGCCTC CGGCGAGATC ATTCAGCACA TCTCGCGCGA TCTGGAGCGG
CAGGAGCGGG GGCTCGGCCC GTCCGTGGTG GCGCTGTCGC GCGGCCGCGC TGCGGCTGAG
TGA
 
Protein sequence
MIALASQQIS GTKSMIVRLA KATIHLTFAA LLAVLVPSAT VFAQHRASSP STTSSGGGAA 
ATPSASSVNG SAGAASAASA SPGPASSAPS ATDGSAGAAS SQPSASTSPE GASDASSGEG
SASSDASAGA SSDAAAPSDQ SAAPDSAAPS PAPEGSSSTL PQDLSPWGMF MQADIVVKAV
MIGLAFASLV TWTVWLAKGI ELAASRRRAQ SCVRKLERAD SLDAARSEIA EGWTCEGTVA
DLMGAAEREL QRSGDLSSEG IKERLAIALS RIEAKAGRDI ARGTGLLATI GATAPFVGLF
GTVWGIMNAF IGISQTKTTN LAVVAPGIAE ALLATALGLV AAIPAVIIYN VFARALSSYR
ALLSDASGEI IQHISRDLER QERGLGPSVV ALSRGRAAAE