Gene Nwi_0674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0674 
Symbol 
ID3674998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp754312 
End bp755736 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content56% 
IMG OID637712225 
ProductABC transporter sulfonate/nitrate transport system substrate-binding protein 
Protein accessionYP_317292 
Protein GI75674871 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.288479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.376687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGAT GGTCGAATTT GATATCGCGA GACAACTCCA TGATCTCTTT CAGAGTTGCT 
AACATGACTG CTGGCATCGC GACTGCGATG ATCAGCATGC TAGGTGCGAC GAACATCGTC
CACGCCGAAG CCATTACGAT AGGCATCGGT CATCAGAGCA TGTGCACCGA TACCTATGCC
GCCGGGATCA TCGTCAAGGA GCTGAAGCTT CTCGAAAAGC ACCTGCCACG CAGCGGAAAG
TATGTCGACG TCACCTATAA TCTCAAGTGG GATGATTATG CGTCGGGCGG ACCCATTACC
AACCAGATGC TGGCTGGAAA GCTCGACATC GGCGTGATGG GAGATTACCC CGTCATCGTG
AATGGCGCCA AGTTCCAGGC CACGAAAAGC TTGAACACAA GTCTGGTGTC GAGCACGGGT
TACAACCTTC GCGGAGCGGG TAACGCCATC GTCGTTCCCG CGTCATCGAA TGTCTATTCT
CTTGCGCAAC TGAAGGGCCG TTCCATCTCA ACCCCGTACG GGAGCGCCGC CTGGGGGATG
CTCATCAAGG CCCTCGAAGA TGCGCATATT TCCTTGAGCG ATGTGGATCT GAAGAATCAG
GCTCCATCGG TCGGCGCCGC GAATATCGCC ACGGGGAAAA TCGACGCGCA TGCGGATTTC
TGCCCGTGGT CGGAGATCAT GGAATACCGC GGCACCGGAC GAAAAATTTA TGACGGAAGC
CAAACAGGTG TCCCCTATCT GCATGGTGTC GTTGTTCGAA AGGATTTCGT CGACAAGTAT
CCTGAGATCA TCGTGGCCTT CATCAAGGCG ATTCACGATG CCGGTGAATG GCTGAAAAAG
GATCCGGCTC TGGCGGCTGC GCAAATGGAG AAATGGACCG GCGTCGAAAA GGAGGTGCTG
TATCTCTATT ATTCGCGGGG CGGGCATCTC ACGGTCGATC CCACGCTGAA GCCGCAGTGG
ATCGAAACCC TTGAATTTGA TCATGGAGTT CTTGCGCGCG CCGACCTTTC GCCGCCGCTC
GATTTCAAGG AATGGGTCGA CGACCGATAC GTCAAGAAAG CCTATGCCGA GCTTGGGCTT
GATTATGCCG CTCAGAGTAA GGAGATCGTT GACCCGCTCA TCGCCAATCG GGACCTGCCG
AACGAGATCT GGCACGCGAA GGACGGCATC CTTTCCTACC CGACGACGGC GGCTTTCCTG
AAGGCCGCGG CCGATTTTCA GGCGACGGGC GTGAAGATCA ATGCCGCCTA TGTCTATGAT
CACGACACCG GACTTAAGCT GTTCGGAACG ACAGCCTTCT ATGTCCGCAA CAAGGATGGA
AGCTATACCG CTTTTCTTCG CAAGGATCCG GCGGAGACCT ATGCGGCGAA GACAGGCGGA
GAGGTTTCAA CGTTCACGGA AGCGATCGCG AGGCAGGCGA TCTAG
 
Protein sequence
MVRWSNLISR DNSMISFRVA NMTAGIATAM ISMLGATNIV HAEAITIGIG HQSMCTDTYA 
AGIIVKELKL LEKHLPRSGK YVDVTYNLKW DDYASGGPIT NQMLAGKLDI GVMGDYPVIV
NGAKFQATKS LNTSLVSSTG YNLRGAGNAI VVPASSNVYS LAQLKGRSIS TPYGSAAWGM
LIKALEDAHI SLSDVDLKNQ APSVGAANIA TGKIDAHADF CPWSEIMEYR GTGRKIYDGS
QTGVPYLHGV VVRKDFVDKY PEIIVAFIKA IHDAGEWLKK DPALAAAQME KWTGVEKEVL
YLYYSRGGHL TVDPTLKPQW IETLEFDHGV LARADLSPPL DFKEWVDDRY VKKAYAELGL
DYAAQSKEIV DPLIANRDLP NEIWHAKDGI LSYPTTAAFL KAAADFQATG VKINAAYVYD
HDTGLKLFGT TAFYVRNKDG SYTAFLRKDP AETYAAKTGG EVSTFTEAIA RQAI